Recombinant:
Article Title: Ribosome-Targeting Antibiotics Impair T Cell Effector Function and Ameliorate Autoimmunity by Blocking Mitochondrial Protein Synthesis
Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Hamster monoclonal anti-mouse CD3 Bio X Cell Cat#: BE0001-1; RRID: AB_1107634 Hamster monoclonal anti-mouse CD28 Bio X Cell Cat#: BE00015-1; RRID: AB_1107624 Hamster monoclonal anti-mouse IFN-gamma Bio X Cell Cat#: BE0055; RRID: AB_1107694 Rat recombinant anti-mouse IL-12 p40 Bio X Cell Clone 17.8; RRID: AB_1107698 Rat monoclonal anti-mouse IL-4 Bio X Cell Cat#: BE0045; RRID: AB_1107707 Rat monoclonal anti-mouse CD4 eBioscience Clone 48-0041; RRID: AB_1107642 Rat monoclonal anti-mouse/rat IL-17A eBioscience Clone eBio17B7; RRID: AB_763580 Rat monoclonal anti-mouse IL-13 eBioscience Clone eBio13A; RRID: AB_763559 Rat monoclonal anti-mouse IFN-gamma eBioscience Clone XMG1.2; RRID: AB_315403 Mouse monoclonal anti-human/mouse T-bet eBioscience Clone eBio4B10; RRID: AB_763634 Rat monoclonal anti-mouse RORgt eBioscience Clone B2D; RRID: AB_315403 Rat monoclonal anti-mouse/human GATA-3 eBioscience Clone TWAJ; RRID: AB_1963600 Rat monoclonal anti-mouse/rat FoxP3 eBioscience Clone FJK-16s; RRID: AB_1518812 Mouse monoclonal anti-mouse CD154 (CD40 Ligand) eBioscience Clone MR1; RRID: AB_2561561 Mouse monoclonal anti-mouse/rat COX1 Abcam Cat#: ab154477 Mouse monoclonal anti-human CD4 Invitrogen Clone SK3; RRID: AB_1937227 Mouse monoclonal anti-human IL-17A eBIoscience Clone eBio64DEC17; RRID: AB_11063994 Mouse monoclonal anti-mouse antihuman CD3 BioLegend Ultra-LEAFTM Clone OKT3; RRID: AB_11150592 Mouse monoclonal anti-mouse antihuman CD28 BioLegend Ultra-LEAFTM Clone CD28.2; RRID: AB_314304 Recombinant anti-SDHA mAb Abcam aCat#: ab139181 Recombinant anti-ND1 mAb Abcam Cat#: ab181848 Recombinant anti-COX1 mAb Abcam Cat#: ab139181 HIF-1 alpha Rabbit mAb Novus biological Cat#: NB100-479: RRID: AB_10000633 AMPKa (23A3) Rabbit mAb Cell Signaling Cat#: 2603; RRID:AB_490795 Phospho-AMPKa (Thr172) Rabbit mAb Cell Signaling Cat#: 2535 Anti-rabbit IgG, HRP-linked Antibody Cell Signaling Cat#: 7074; RRID:AB_2099233 Anti-mouse IgG, HRP-linked Antibody Cell Signaling Cat#: 7076; RRID:AB_330924 Rabbit polyclonal anti-human/mouse beta-actin Cell Signaling Cat#: 4967; RRID:AB_330288 Chemicals, Peptides, and Recombinant Proteins IMDM GlutaMAX Thermo Fisher 3198-022 RPMI 1640 GlutaMAX Thermo Fisher 61870-010 X-Vivo 15 medium Lonza BE02-060F Seahorse XF DMEM medium, pH 7.4 Agilent 103575-100 Head-inactivated FCS Biochrom S 0115 – Lot# 1289W Penicillin-streptomycin Millipore P0781 2-mercaptoethanol Gibco #21985-023 Recombinant human TGF-beta Peprotech 100-21 (Continued on next page) e1 Immunity 54, 68–83.e1–e6, January 12, 2021
Article Title: Ribosome-Targeting Antibiotics Impair T Cell Effector Function and Ameliorate Autoimmunity by Blocking Mitochondrial Protein Synthesis.
Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Hamster monoclonal anti-mouse CD3 Bio X Cell Cat#: BE0001-1; RRID: AB_1107634 Hamster monoclonal anti-mouse CD28 Bio X Cell Cat#: BE00015-1; RRID: AB_1107624 Hamster monoclonal anti-mouse IFN-gamma Bio X Cell Cat#: BE0055; RRID: AB_1107694 Rat recombinant anti-mouse IL-12 p40 Bio X Cell Clone 17.8; RRID: AB_1107698 Rat monoclonal anti-mouse IL-4 Bio X Cell Cat#: BE0045; RRID: AB_1107707 Rat monoclonal anti-mouse CD4 eBioscience Clone 48-0041; RRID: AB_1107642 Rat monoclonal anti-mouse/rat IL-17A eBioscience Clone eBio17B7; RRID: AB_763580 Rat monoclonal anti-mouse IL-13 eBioscience Clone eBio13A; RRID: AB_763559 Rat monoclonal anti-mouse IFN-gamma eBioscience Clone XMG1.2; RRID: AB_315403 Mouse monoclonal anti-human/mouse T-bet eBioscience Clone eBio4B10; RRID: AB_763634 Rat monoclonal anti-mouse RORgt eBioscience Clone B2D; RRID: AB_315403 Rat monoclonal anti-mouse/human GATA-3 eBioscience Clone TWAJ; RRID: AB_1963600 Rat monoclonal anti-mouse/rat FoxP3 eBioscience Clone FJK-16s; RRID: AB_1518812 Mouse monoclonal anti-mouse CD154 (CD40 Ligand) eBioscience Clone MR1; RRID: AB_2561561 Mouse monoclonal anti-mouse/rat COX1 Abcam Cat#: ab154477 Mouse monoclonal anti-human CD4 Invitrogen Clone SK3; RRID: AB_1937227 Mouse monoclonal anti-human IL-17A eBIoscience Clone eBio64DEC17; RRID: AB_11063994 Mouse monoclonal anti-mouse antihuman CD3 BioLegend Ultra-LEAFTM Clone OKT3; RRID: AB_11150592 Mouse monoclonal anti-mouse antihuman CD28 BioLegend Ultra-LEAFTM Clone CD28.2; RRID: AB_314304 Recombinant anti-SDHA mAb Abcam aCat#: ab139181 Recombinant anti-ND1 mAb Abcam Cat#: ab181848 Recombinant anti-COX1 mAb Abcam Cat#: ab139181 HIF-1 alpha Rabbit mAb Novus biological Cat#: NB100-479: RRID: AB_10000633 AMPKa (23A3) Rabbit mAb Cell Signaling Cat#: 2603; RRID:AB_490795 Phospho-AMPKa (Thr172) Rabbit mAb Cell Signaling Cat#: 2535 Anti-rabbit IgG, HRP-linked Antibody Cell Signaling Cat#: 7074; RRID:AB_2099233 Anti-mouse IgG, HRP-linked Antibody Cell Signaling Cat#: 7076; RRID:AB_330924 Rabbit polyclonal anti-human/mouse beta-actin Cell Signaling Cat#: 4967; RRID:AB_330288 Chemicals, Peptides, and Recombinant Proteins IMDM GlutaMAX Thermo Fisher 3198-022 RPMI 1640 GlutaMAX Thermo Fisher 61870-010 X-Vivo 15 medium Lonza BE02-060F Seahorse XF DMEM medium, pH 7.4 Agilent 103575-100 Head-inactivated FCS Biochrom S 0115 – Lot# 1289W Penicillin-streptomycin Millipore P0781 2-mercaptoethanol Gibco #21985-023 Recombinant human TGF-beta Peprotech 100-21 (Continued on next page) Immunity 54, 1–16.e1–e6, January 12, 2021 e1
Derivative Assay:
Article Title: Ribosome-Targeting Antibiotics Impair T Cell Effector Function and Ameliorate Autoimmunity by Blocking Mitochondrial Protein Synthesis
Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Hamster monoclonal anti-mouse CD3 Bio X Cell Cat#: BE0001-1; RRID: AB_1107634 Hamster monoclonal anti-mouse CD28 Bio X Cell Cat#: BE00015-1; RRID: AB_1107624 Hamster monoclonal anti-mouse IFN-gamma Bio X Cell Cat#: BE0055; RRID: AB_1107694 Rat recombinant anti-mouse IL-12 p40 Bio X Cell Clone 17.8; RRID: AB_1107698 Rat monoclonal anti-mouse IL-4 Bio X Cell Cat#: BE0045; RRID: AB_1107707 Rat monoclonal anti-mouse CD4 eBioscience Clone 48-0041; RRID: AB_1107642 Rat monoclonal anti-mouse/rat IL-17A eBioscience Clone eBio17B7; RRID: AB_763580 Rat monoclonal anti-mouse IL-13 eBioscience Clone eBio13A; RRID: AB_763559 Rat monoclonal anti-mouse IFN-gamma eBioscience Clone XMG1.2; RRID: AB_315403 Mouse monoclonal anti-human/mouse T-bet eBioscience Clone eBio4B10; RRID: AB_763634 Rat monoclonal anti-mouse RORgt eBioscience Clone B2D; RRID: AB_315403 Rat monoclonal anti-mouse/human GATA-3 eBioscience Clone TWAJ; RRID: AB_1963600 Rat monoclonal anti-mouse/rat FoxP3 eBioscience Clone FJK-16s; RRID: AB_1518812 Mouse monoclonal anti-mouse CD154 (CD40 Ligand) eBioscience Clone MR1; RRID: AB_2561561 Mouse monoclonal anti-mouse/rat COX1 Abcam Cat#: ab154477 Mouse monoclonal anti-human CD4 Invitrogen Clone SK3; RRID: AB_1937227 Mouse monoclonal anti-human IL-17A eBIoscience Clone eBio64DEC17; RRID: AB_11063994 Mouse monoclonal anti-mouse antihuman CD3 BioLegend Ultra-LEAFTM Clone OKT3; RRID: AB_11150592 Mouse monoclonal anti-mouse antihuman CD28 BioLegend Ultra-LEAFTM Clone CD28.2; RRID: AB_314304 Recombinant anti-SDHA mAb Abcam aCat#: ab139181 Recombinant anti-ND1 mAb Abcam Cat#: ab181848 Recombinant anti-COX1 mAb Abcam Cat#: ab139181 HIF-1 alpha Rabbit mAb Novus biological Cat#: NB100-479: RRID: AB_10000633 AMPKa (23A3) Rabbit mAb Cell Signaling Cat#: 2603; RRID:AB_490795 Phospho-AMPKa (Thr172) Rabbit mAb Cell Signaling Cat#: 2535 Anti-rabbit IgG, HRP-linked Antibody Cell Signaling Cat#: 7074; RRID:AB_2099233 Anti-mouse IgG, HRP-linked Antibody Cell Signaling Cat#: 7076; RRID:AB_330924 Rabbit polyclonal anti-human/mouse beta-actin Cell Signaling Cat#: 4967; RRID:AB_330288 Chemicals, Peptides, and Recombinant Proteins IMDM GlutaMAX Thermo Fisher 3198-022 RPMI 1640 GlutaMAX Thermo Fisher 61870-010 X-Vivo 15 medium Lonza BE02-060F Seahorse XF DMEM medium, pH 7.4 Agilent 103575-100 Head-inactivated FCS Biochrom S 0115 – Lot# 1289W Penicillin-streptomycin Millipore P0781 2-mercaptoethanol Gibco #21985-023 Recombinant human TGF-beta Peprotech 100-21 (Continued on next page) e1 Immunity 54, 68–83.e1–e6, January 12, 2021
Article Title: Ribosome-Targeting Antibiotics Impair T Cell Effector Function and Ameliorate Autoimmunity by Blocking Mitochondrial Protein Synthesis.
Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Hamster monoclonal anti-mouse CD3 Bio X Cell Cat#: BE0001-1; RRID: AB_1107634 Hamster monoclonal anti-mouse CD28 Bio X Cell Cat#: BE00015-1; RRID: AB_1107624 Hamster monoclonal anti-mouse IFN-gamma Bio X Cell Cat#: BE0055; RRID: AB_1107694 Rat recombinant anti-mouse IL-12 p40 Bio X Cell Clone 17.8; RRID: AB_1107698 Rat monoclonal anti-mouse IL-4 Bio X Cell Cat#: BE0045; RRID: AB_1107707 Rat monoclonal anti-mouse CD4 eBioscience Clone 48-0041; RRID: AB_1107642 Rat monoclonal anti-mouse/rat IL-17A eBioscience Clone eBio17B7; RRID: AB_763580 Rat monoclonal anti-mouse IL-13 eBioscience Clone eBio13A; RRID: AB_763559 Rat monoclonal anti-mouse IFN-gamma eBioscience Clone XMG1.2; RRID: AB_315403 Mouse monoclonal anti-human/mouse T-bet eBioscience Clone eBio4B10; RRID: AB_763634 Rat monoclonal anti-mouse RORgt eBioscience Clone B2D; RRID: AB_315403 Rat monoclonal anti-mouse/human GATA-3 eBioscience Clone TWAJ; RRID: AB_1963600 Rat monoclonal anti-mouse/rat FoxP3 eBioscience Clone FJK-16s; RRID: AB_1518812 Mouse monoclonal anti-mouse CD154 (CD40 Ligand) eBioscience Clone MR1; RRID: AB_2561561 Mouse monoclonal anti-mouse/rat COX1 Abcam Cat#: ab154477 Mouse monoclonal anti-human CD4 Invitrogen Clone SK3; RRID: AB_1937227 Mouse monoclonal anti-human IL-17A eBIoscience Clone eBio64DEC17; RRID: AB_11063994 Mouse monoclonal anti-mouse antihuman CD3 BioLegend Ultra-LEAFTM Clone OKT3; RRID: AB_11150592 Mouse monoclonal anti-mouse antihuman CD28 BioLegend Ultra-LEAFTM Clone CD28.2; RRID: AB_314304 Recombinant anti-SDHA mAb Abcam aCat#: ab139181 Recombinant anti-ND1 mAb Abcam Cat#: ab181848 Recombinant anti-COX1 mAb Abcam Cat#: ab139181 HIF-1 alpha Rabbit mAb Novus biological Cat#: NB100-479: RRID: AB_10000633 AMPKa (23A3) Rabbit mAb Cell Signaling Cat#: 2603; RRID:AB_490795 Phospho-AMPKa (Thr172) Rabbit mAb Cell Signaling Cat#: 2535 Anti-rabbit IgG, HRP-linked Antibody Cell Signaling Cat#: 7074; RRID:AB_2099233 Anti-mouse IgG, HRP-linked Antibody Cell Signaling Cat#: 7076; RRID:AB_330924 Rabbit polyclonal anti-human/mouse beta-actin Cell Signaling Cat#: 4967; RRID:AB_330288 Chemicals, Peptides, and Recombinant Proteins IMDM GlutaMAX Thermo Fisher 3198-022 RPMI 1640 GlutaMAX Thermo Fisher 61870-010 X-Vivo 15 medium Lonza BE02-060F Seahorse XF DMEM medium, pH 7.4 Agilent 103575-100 Head-inactivated FCS Biochrom S 0115 – Lot# 1289W Penicillin-streptomycin Millipore P0781 2-mercaptoethanol Gibco #21985-023 Recombinant human TGF-beta Peprotech 100-21 (Continued on next page) Immunity 54, 1–16.e1–e6, January 12, 2021 e1
Staining:
Article Title: Ribosome-Targeting Antibiotics Impair T Cell Effector Function and Ameliorate Autoimmunity by Blocking Mitochondrial Protein Synthesis
Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Hamster monoclonal anti-mouse CD3 Bio X Cell Cat#: BE0001-1; RRID: AB_1107634 Hamster monoclonal anti-mouse CD28 Bio X Cell Cat#: BE00015-1; RRID: AB_1107624 Hamster monoclonal anti-mouse IFN-gamma Bio X Cell Cat#: BE0055; RRID: AB_1107694 Rat recombinant anti-mouse IL-12 p40 Bio X Cell Clone 17.8; RRID: AB_1107698 Rat monoclonal anti-mouse IL-4 Bio X Cell Cat#: BE0045; RRID: AB_1107707 Rat monoclonal anti-mouse CD4 eBioscience Clone 48-0041; RRID: AB_1107642 Rat monoclonal anti-mouse/rat IL-17A eBioscience Clone eBio17B7; RRID: AB_763580 Rat monoclonal anti-mouse IL-13 eBioscience Clone eBio13A; RRID: AB_763559 Rat monoclonal anti-mouse IFN-gamma eBioscience Clone XMG1.2; RRID: AB_315403 Mouse monoclonal anti-human/mouse T-bet eBioscience Clone eBio4B10; RRID: AB_763634 Rat monoclonal anti-mouse RORgt eBioscience Clone B2D; RRID: AB_315403 Rat monoclonal anti-mouse/human GATA-3 eBioscience Clone TWAJ; RRID: AB_1963600 Rat monoclonal anti-mouse/rat FoxP3 eBioscience Clone FJK-16s; RRID: AB_1518812 Mouse monoclonal anti-mouse CD154 (CD40 Ligand) eBioscience Clone MR1; RRID: AB_2561561 Mouse monoclonal anti-mouse/rat COX1 Abcam Cat#: ab154477 Mouse monoclonal anti-human CD4 Invitrogen Clone SK3; RRID: AB_1937227 Mouse monoclonal anti-human IL-17A eBIoscience Clone eBio64DEC17; RRID: AB_11063994 Mouse monoclonal anti-mouse antihuman CD3 BioLegend Ultra-LEAFTM Clone OKT3; RRID: AB_11150592 Mouse monoclonal anti-mouse antihuman CD28 BioLegend Ultra-LEAFTM Clone CD28.2; RRID: AB_314304 Recombinant anti-SDHA mAb Abcam aCat#: ab139181 Recombinant anti-ND1 mAb Abcam Cat#: ab181848 Recombinant anti-COX1 mAb Abcam Cat#: ab139181 HIF-1 alpha Rabbit mAb Novus biological Cat#: NB100-479: RRID: AB_10000633 AMPKa (23A3) Rabbit mAb Cell Signaling Cat#: 2603; RRID:AB_490795 Phospho-AMPKa (Thr172) Rabbit mAb Cell Signaling Cat#: 2535 Anti-rabbit IgG, HRP-linked Antibody Cell Signaling Cat#: 7074; RRID:AB_2099233 Anti-mouse IgG, HRP-linked Antibody Cell Signaling Cat#: 7076; RRID:AB_330924 Rabbit polyclonal anti-human/mouse beta-actin Cell Signaling Cat#: 4967; RRID:AB_330288 Chemicals, Peptides, and Recombinant Proteins IMDM GlutaMAX Thermo Fisher 3198-022 RPMI 1640 GlutaMAX Thermo Fisher 61870-010 X-Vivo 15 medium Lonza BE02-060F Seahorse XF DMEM medium, pH 7.4 Agilent 103575-100 Head-inactivated FCS Biochrom S 0115 – Lot# 1289W Penicillin-streptomycin Millipore P0781 2-mercaptoethanol Gibco #21985-023 Recombinant human TGF-beta Peprotech 100-21 (Continued on next page) e1 Immunity 54, 68–83.e1–e6, January 12, 2021
Article Title: Ribosome-Targeting Antibiotics Impair T Cell Effector Function and Ameliorate Autoimmunity by Blocking Mitochondrial Protein Synthesis.
Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Hamster monoclonal anti-mouse CD3 Bio X Cell Cat#: BE0001-1; RRID: AB_1107634 Hamster monoclonal anti-mouse CD28 Bio X Cell Cat#: BE00015-1; RRID: AB_1107624 Hamster monoclonal anti-mouse IFN-gamma Bio X Cell Cat#: BE0055; RRID: AB_1107694 Rat recombinant anti-mouse IL-12 p40 Bio X Cell Clone 17.8; RRID: AB_1107698 Rat monoclonal anti-mouse IL-4 Bio X Cell Cat#: BE0045; RRID: AB_1107707 Rat monoclonal anti-mouse CD4 eBioscience Clone 48-0041; RRID: AB_1107642 Rat monoclonal anti-mouse/rat IL-17A eBioscience Clone eBio17B7; RRID: AB_763580 Rat monoclonal anti-mouse IL-13 eBioscience Clone eBio13A; RRID: AB_763559 Rat monoclonal anti-mouse IFN-gamma eBioscience Clone XMG1.2; RRID: AB_315403 Mouse monoclonal anti-human/mouse T-bet eBioscience Clone eBio4B10; RRID: AB_763634 Rat monoclonal anti-mouse RORgt eBioscience Clone B2D; RRID: AB_315403 Rat monoclonal anti-mouse/human GATA-3 eBioscience Clone TWAJ; RRID: AB_1963600 Rat monoclonal anti-mouse/rat FoxP3 eBioscience Clone FJK-16s; RRID: AB_1518812 Mouse monoclonal anti-mouse CD154 (CD40 Ligand) eBioscience Clone MR1; RRID: AB_2561561 Mouse monoclonal anti-mouse/rat COX1 Abcam Cat#: ab154477 Mouse monoclonal anti-human CD4 Invitrogen Clone SK3; RRID: AB_1937227 Mouse monoclonal anti-human IL-17A eBIoscience Clone eBio64DEC17; RRID: AB_11063994 Mouse monoclonal anti-mouse antihuman CD3 BioLegend Ultra-LEAFTM Clone OKT3; RRID: AB_11150592 Mouse monoclonal anti-mouse antihuman CD28 BioLegend Ultra-LEAFTM Clone CD28.2; RRID: AB_314304 Recombinant anti-SDHA mAb Abcam aCat#: ab139181 Recombinant anti-ND1 mAb Abcam Cat#: ab181848 Recombinant anti-COX1 mAb Abcam Cat#: ab139181 HIF-1 alpha Rabbit mAb Novus biological Cat#: NB100-479: RRID: AB_10000633 AMPKa (23A3) Rabbit mAb Cell Signaling Cat#: 2603; RRID:AB_490795 Phospho-AMPKa (Thr172) Rabbit mAb Cell Signaling Cat#: 2535 Anti-rabbit IgG, HRP-linked Antibody Cell Signaling Cat#: 7074; RRID:AB_2099233 Anti-mouse IgG, HRP-linked Antibody Cell Signaling Cat#: 7076; RRID:AB_330924 Rabbit polyclonal anti-human/mouse beta-actin Cell Signaling Cat#: 4967; RRID:AB_330288 Chemicals, Peptides, and Recombinant Proteins IMDM GlutaMAX Thermo Fisher 3198-022 RPMI 1640 GlutaMAX Thermo Fisher 61870-010 X-Vivo 15 medium Lonza BE02-060F Seahorse XF DMEM medium, pH 7.4 Agilent 103575-100 Head-inactivated FCS Biochrom S 0115 – Lot# 1289W Penicillin-streptomycin Millipore P0781 2-mercaptoethanol Gibco #21985-023 Recombinant human TGF-beta Peprotech 100-21 (Continued on next page) Immunity 54, 1–16.e1–e6, January 12, 2021 e1
Isolation:
Article Title: Ribosome-Targeting Antibiotics Impair T Cell Effector Function and Ameliorate Autoimmunity by Blocking Mitochondrial Protein Synthesis
Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Hamster monoclonal anti-mouse CD3 Bio X Cell Cat#: BE0001-1; RRID: AB_1107634 Hamster monoclonal anti-mouse CD28 Bio X Cell Cat#: BE00015-1; RRID: AB_1107624 Hamster monoclonal anti-mouse IFN-gamma Bio X Cell Cat#: BE0055; RRID: AB_1107694 Rat recombinant anti-mouse IL-12 p40 Bio X Cell Clone 17.8; RRID: AB_1107698 Rat monoclonal anti-mouse IL-4 Bio X Cell Cat#: BE0045; RRID: AB_1107707 Rat monoclonal anti-mouse CD4 eBioscience Clone 48-0041; RRID: AB_1107642 Rat monoclonal anti-mouse/rat IL-17A eBioscience Clone eBio17B7; RRID: AB_763580 Rat monoclonal anti-mouse IL-13 eBioscience Clone eBio13A; RRID: AB_763559 Rat monoclonal anti-mouse IFN-gamma eBioscience Clone XMG1.2; RRID: AB_315403 Mouse monoclonal anti-human/mouse T-bet eBioscience Clone eBio4B10; RRID: AB_763634 Rat monoclonal anti-mouse RORgt eBioscience Clone B2D; RRID: AB_315403 Rat monoclonal anti-mouse/human GATA-3 eBioscience Clone TWAJ; RRID: AB_1963600 Rat monoclonal anti-mouse/rat FoxP3 eBioscience Clone FJK-16s; RRID: AB_1518812 Mouse monoclonal anti-mouse CD154 (CD40 Ligand) eBioscience Clone MR1; RRID: AB_2561561 Mouse monoclonal anti-mouse/rat COX1 Abcam Cat#: ab154477 Mouse monoclonal anti-human CD4 Invitrogen Clone SK3; RRID: AB_1937227 Mouse monoclonal anti-human IL-17A eBIoscience Clone eBio64DEC17; RRID: AB_11063994 Mouse monoclonal anti-mouse antihuman CD3 BioLegend Ultra-LEAFTM Clone OKT3; RRID: AB_11150592 Mouse monoclonal anti-mouse antihuman CD28 BioLegend Ultra-LEAFTM Clone CD28.2; RRID: AB_314304 Recombinant anti-SDHA mAb Abcam aCat#: ab139181 Recombinant anti-ND1 mAb Abcam Cat#: ab181848 Recombinant anti-COX1 mAb Abcam Cat#: ab139181 HIF-1 alpha Rabbit mAb Novus biological Cat#: NB100-479: RRID: AB_10000633 AMPKa (23A3) Rabbit mAb Cell Signaling Cat#: 2603; RRID:AB_490795 Phospho-AMPKa (Thr172) Rabbit mAb Cell Signaling Cat#: 2535 Anti-rabbit IgG, HRP-linked Antibody Cell Signaling Cat#: 7074; RRID:AB_2099233 Anti-mouse IgG, HRP-linked Antibody Cell Signaling Cat#: 7076; RRID:AB_330924 Rabbit polyclonal anti-human/mouse beta-actin Cell Signaling Cat#: 4967; RRID:AB_330288 Chemicals, Peptides, and Recombinant Proteins IMDM GlutaMAX Thermo Fisher 3198-022 RPMI 1640 GlutaMAX Thermo Fisher 61870-010 X-Vivo 15 medium Lonza BE02-060F Seahorse XF DMEM medium, pH 7.4 Agilent 103575-100 Head-inactivated FCS Biochrom S 0115 – Lot# 1289W Penicillin-streptomycin Millipore P0781 2-mercaptoethanol Gibco #21985-023 Recombinant human TGF-beta Peprotech 100-21 (Continued on next page) e1 Immunity 54, 68–83.e1–e6, January 12, 2021
Article Title: Ribosome-Targeting Antibiotics Impair T Cell Effector Function and Ameliorate Autoimmunity by Blocking Mitochondrial Protein Synthesis.
Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Hamster monoclonal anti-mouse CD3 Bio X Cell Cat#: BE0001-1; RRID: AB_1107634 Hamster monoclonal anti-mouse CD28 Bio X Cell Cat#: BE00015-1; RRID: AB_1107624 Hamster monoclonal anti-mouse IFN-gamma Bio X Cell Cat#: BE0055; RRID: AB_1107694 Rat recombinant anti-mouse IL-12 p40 Bio X Cell Clone 17.8; RRID: AB_1107698 Rat monoclonal anti-mouse IL-4 Bio X Cell Cat#: BE0045; RRID: AB_1107707 Rat monoclonal anti-mouse CD4 eBioscience Clone 48-0041; RRID: AB_1107642 Rat monoclonal anti-mouse/rat IL-17A eBioscience Clone eBio17B7; RRID: AB_763580 Rat monoclonal anti-mouse IL-13 eBioscience Clone eBio13A; RRID: AB_763559 Rat monoclonal anti-mouse IFN-gamma eBioscience Clone XMG1.2; RRID: AB_315403 Mouse monoclonal anti-human/mouse T-bet eBioscience Clone eBio4B10; RRID: AB_763634 Rat monoclonal anti-mouse RORgt eBioscience Clone B2D; RRID: AB_315403 Rat monoclonal anti-mouse/human GATA-3 eBioscience Clone TWAJ; RRID: AB_1963600 Rat monoclonal anti-mouse/rat FoxP3 eBioscience Clone FJK-16s; RRID: AB_1518812 Mouse monoclonal anti-mouse CD154 (CD40 Ligand) eBioscience Clone MR1; RRID: AB_2561561 Mouse monoclonal anti-mouse/rat COX1 Abcam Cat#: ab154477 Mouse monoclonal anti-human CD4 Invitrogen Clone SK3; RRID: AB_1937227 Mouse monoclonal anti-human IL-17A eBIoscience Clone eBio64DEC17; RRID: AB_11063994 Mouse monoclonal anti-mouse antihuman CD3 BioLegend Ultra-LEAFTM Clone OKT3; RRID: AB_11150592 Mouse monoclonal anti-mouse antihuman CD28 BioLegend Ultra-LEAFTM Clone CD28.2; RRID: AB_314304 Recombinant anti-SDHA mAb Abcam aCat#: ab139181 Recombinant anti-ND1 mAb Abcam Cat#: ab181848 Recombinant anti-COX1 mAb Abcam Cat#: ab139181 HIF-1 alpha Rabbit mAb Novus biological Cat#: NB100-479: RRID: AB_10000633 AMPKa (23A3) Rabbit mAb Cell Signaling Cat#: 2603; RRID:AB_490795 Phospho-AMPKa (Thr172) Rabbit mAb Cell Signaling Cat#: 2535 Anti-rabbit IgG, HRP-linked Antibody Cell Signaling Cat#: 7074; RRID:AB_2099233 Anti-mouse IgG, HRP-linked Antibody Cell Signaling Cat#: 7076; RRID:AB_330924 Rabbit polyclonal anti-human/mouse beta-actin Cell Signaling Cat#: 4967; RRID:AB_330288 Chemicals, Peptides, and Recombinant Proteins IMDM GlutaMAX Thermo Fisher 3198-022 RPMI 1640 GlutaMAX Thermo Fisher 61870-010 X-Vivo 15 medium Lonza BE02-060F Seahorse XF DMEM medium, pH 7.4 Agilent 103575-100 Head-inactivated FCS Biochrom S 0115 – Lot# 1289W Penicillin-streptomycin Millipore P0781 2-mercaptoethanol Gibco #21985-023 Recombinant human TGF-beta Peprotech 100-21 (Continued on next page) Immunity 54, 1–16.e1–e6, January 12, 2021 e1
Cell Isolation:
Article Title: Ribosome-Targeting Antibiotics Impair T Cell Effector Function and Ameliorate Autoimmunity by Blocking Mitochondrial Protein Synthesis
Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Hamster monoclonal anti-mouse CD3 Bio X Cell Cat#: BE0001-1; RRID: AB_1107634 Hamster monoclonal anti-mouse CD28 Bio X Cell Cat#: BE00015-1; RRID: AB_1107624 Hamster monoclonal anti-mouse IFN-gamma Bio X Cell Cat#: BE0055; RRID: AB_1107694 Rat recombinant anti-mouse IL-12 p40 Bio X Cell Clone 17.8; RRID: AB_1107698 Rat monoclonal anti-mouse IL-4 Bio X Cell Cat#: BE0045; RRID: AB_1107707 Rat monoclonal anti-mouse CD4 eBioscience Clone 48-0041; RRID: AB_1107642 Rat monoclonal anti-mouse/rat IL-17A eBioscience Clone eBio17B7; RRID: AB_763580 Rat monoclonal anti-mouse IL-13 eBioscience Clone eBio13A; RRID: AB_763559 Rat monoclonal anti-mouse IFN-gamma eBioscience Clone XMG1.2; RRID: AB_315403 Mouse monoclonal anti-human/mouse T-bet eBioscience Clone eBio4B10; RRID: AB_763634 Rat monoclonal anti-mouse RORgt eBioscience Clone B2D; RRID: AB_315403 Rat monoclonal anti-mouse/human GATA-3 eBioscience Clone TWAJ; RRID: AB_1963600 Rat monoclonal anti-mouse/rat FoxP3 eBioscience Clone FJK-16s; RRID: AB_1518812 Mouse monoclonal anti-mouse CD154 (CD40 Ligand) eBioscience Clone MR1; RRID: AB_2561561 Mouse monoclonal anti-mouse/rat COX1 Abcam Cat#: ab154477 Mouse monoclonal anti-human CD4 Invitrogen Clone SK3; RRID: AB_1937227 Mouse monoclonal anti-human IL-17A eBIoscience Clone eBio64DEC17; RRID: AB_11063994 Mouse monoclonal anti-mouse antihuman CD3 BioLegend Ultra-LEAFTM Clone OKT3; RRID: AB_11150592 Mouse monoclonal anti-mouse antihuman CD28 BioLegend Ultra-LEAFTM Clone CD28.2; RRID: AB_314304 Recombinant anti-SDHA mAb Abcam aCat#: ab139181 Recombinant anti-ND1 mAb Abcam Cat#: ab181848 Recombinant anti-COX1 mAb Abcam Cat#: ab139181 HIF-1 alpha Rabbit mAb Novus biological Cat#: NB100-479: RRID: AB_10000633 AMPKa (23A3) Rabbit mAb Cell Signaling Cat#: 2603; RRID:AB_490795 Phospho-AMPKa (Thr172) Rabbit mAb Cell Signaling Cat#: 2535 Anti-rabbit IgG, HRP-linked Antibody Cell Signaling Cat#: 7074; RRID:AB_2099233 Anti-mouse IgG, HRP-linked Antibody Cell Signaling Cat#: 7076; RRID:AB_330924 Rabbit polyclonal anti-human/mouse beta-actin Cell Signaling Cat#: 4967; RRID:AB_330288 Chemicals, Peptides, and Recombinant Proteins IMDM GlutaMAX Thermo Fisher 3198-022 RPMI 1640 GlutaMAX Thermo Fisher 61870-010 X-Vivo 15 medium Lonza BE02-060F Seahorse XF DMEM medium, pH 7.4 Agilent 103575-100 Head-inactivated FCS Biochrom S 0115 – Lot# 1289W Penicillin-streptomycin Millipore P0781 2-mercaptoethanol Gibco #21985-023 Recombinant human TGF-beta Peprotech 100-21 (Continued on next page) e1 Immunity 54, 68–83.e1–e6, January 12, 2021
Article Title: Ribosome-Targeting Antibiotics Impair T Cell Effector Function and Ameliorate Autoimmunity by Blocking Mitochondrial Protein Synthesis.
Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Hamster monoclonal anti-mouse CD3 Bio X Cell Cat#: BE0001-1; RRID: AB_1107634 Hamster monoclonal anti-mouse CD28 Bio X Cell Cat#: BE00015-1; RRID: AB_1107624 Hamster monoclonal anti-mouse IFN-gamma Bio X Cell Cat#: BE0055; RRID: AB_1107694 Rat recombinant anti-mouse IL-12 p40 Bio X Cell Clone 17.8; RRID: AB_1107698 Rat monoclonal anti-mouse IL-4 Bio X Cell Cat#: BE0045; RRID: AB_1107707 Rat monoclonal anti-mouse CD4 eBioscience Clone 48-0041; RRID: AB_1107642 Rat monoclonal anti-mouse/rat IL-17A eBioscience Clone eBio17B7; RRID: AB_763580 Rat monoclonal anti-mouse IL-13 eBioscience Clone eBio13A; RRID: AB_763559 Rat monoclonal anti-mouse IFN-gamma eBioscience Clone XMG1.2; RRID: AB_315403 Mouse monoclonal anti-human/mouse T-bet eBioscience Clone eBio4B10; RRID: AB_763634 Rat monoclonal anti-mouse RORgt eBioscience Clone B2D; RRID: AB_315403 Rat monoclonal anti-mouse/human GATA-3 eBioscience Clone TWAJ; RRID: AB_1963600 Rat monoclonal anti-mouse/rat FoxP3 eBioscience Clone FJK-16s; RRID: AB_1518812 Mouse monoclonal anti-mouse CD154 (CD40 Ligand) eBioscience Clone MR1; RRID: AB_2561561 Mouse monoclonal anti-mouse/rat COX1 Abcam Cat#: ab154477 Mouse monoclonal anti-human CD4 Invitrogen Clone SK3; RRID: AB_1937227 Mouse monoclonal anti-human IL-17A eBIoscience Clone eBio64DEC17; RRID: AB_11063994 Mouse monoclonal anti-mouse antihuman CD3 BioLegend Ultra-LEAFTM Clone OKT3; RRID: AB_11150592 Mouse monoclonal anti-mouse antihuman CD28 BioLegend Ultra-LEAFTM Clone CD28.2; RRID: AB_314304 Recombinant anti-SDHA mAb Abcam aCat#: ab139181 Recombinant anti-ND1 mAb Abcam Cat#: ab181848 Recombinant anti-COX1 mAb Abcam Cat#: ab139181 HIF-1 alpha Rabbit mAb Novus biological Cat#: NB100-479: RRID: AB_10000633 AMPKa (23A3) Rabbit mAb Cell Signaling Cat#: 2603; RRID:AB_490795 Phospho-AMPKa (Thr172) Rabbit mAb Cell Signaling Cat#: 2535 Anti-rabbit IgG, HRP-linked Antibody Cell Signaling Cat#: 7074; RRID:AB_2099233 Anti-mouse IgG, HRP-linked Antibody Cell Signaling Cat#: 7076; RRID:AB_330924 Rabbit polyclonal anti-human/mouse beta-actin Cell Signaling Cat#: 4967; RRID:AB_330288 Chemicals, Peptides, and Recombinant Proteins IMDM GlutaMAX Thermo Fisher 3198-022 RPMI 1640 GlutaMAX Thermo Fisher 61870-010 X-Vivo 15 medium Lonza BE02-060F Seahorse XF DMEM medium, pH 7.4 Agilent 103575-100 Head-inactivated FCS Biochrom S 0115 – Lot# 1289W Penicillin-streptomycin Millipore P0781 2-mercaptoethanol Gibco #21985-023 Recombinant human TGF-beta Peprotech 100-21 (Continued on next page) Immunity 54, 1–16.e1–e6, January 12, 2021 e1
Lactate Assay:
Article Title: Ribosome-Targeting Antibiotics Impair T Cell Effector Function and Ameliorate Autoimmunity by Blocking Mitochondrial Protein Synthesis
Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Hamster monoclonal anti-mouse CD3 Bio X Cell Cat#: BE0001-1; RRID: AB_1107634 Hamster monoclonal anti-mouse CD28 Bio X Cell Cat#: BE00015-1; RRID: AB_1107624 Hamster monoclonal anti-mouse IFN-gamma Bio X Cell Cat#: BE0055; RRID: AB_1107694 Rat recombinant anti-mouse IL-12 p40 Bio X Cell Clone 17.8; RRID: AB_1107698 Rat monoclonal anti-mouse IL-4 Bio X Cell Cat#: BE0045; RRID: AB_1107707 Rat monoclonal anti-mouse CD4 eBioscience Clone 48-0041; RRID: AB_1107642 Rat monoclonal anti-mouse/rat IL-17A eBioscience Clone eBio17B7; RRID: AB_763580 Rat monoclonal anti-mouse IL-13 eBioscience Clone eBio13A; RRID: AB_763559 Rat monoclonal anti-mouse IFN-gamma eBioscience Clone XMG1.2; RRID: AB_315403 Mouse monoclonal anti-human/mouse T-bet eBioscience Clone eBio4B10; RRID: AB_763634 Rat monoclonal anti-mouse RORgt eBioscience Clone B2D; RRID: AB_315403 Rat monoclonal anti-mouse/human GATA-3 eBioscience Clone TWAJ; RRID: AB_1963600 Rat monoclonal anti-mouse/rat FoxP3 eBioscience Clone FJK-16s; RRID: AB_1518812 Mouse monoclonal anti-mouse CD154 (CD40 Ligand) eBioscience Clone MR1; RRID: AB_2561561 Mouse monoclonal anti-mouse/rat COX1 Abcam Cat#: ab154477 Mouse monoclonal anti-human CD4 Invitrogen Clone SK3; RRID: AB_1937227 Mouse monoclonal anti-human IL-17A eBIoscience Clone eBio64DEC17; RRID: AB_11063994 Mouse monoclonal anti-mouse antihuman CD3 BioLegend Ultra-LEAFTM Clone OKT3; RRID: AB_11150592 Mouse monoclonal anti-mouse antihuman CD28 BioLegend Ultra-LEAFTM Clone CD28.2; RRID: AB_314304 Recombinant anti-SDHA mAb Abcam aCat#: ab139181 Recombinant anti-ND1 mAb Abcam Cat#: ab181848 Recombinant anti-COX1 mAb Abcam Cat#: ab139181 HIF-1 alpha Rabbit mAb Novus biological Cat#: NB100-479: RRID: AB_10000633 AMPKa (23A3) Rabbit mAb Cell Signaling Cat#: 2603; RRID:AB_490795 Phospho-AMPKa (Thr172) Rabbit mAb Cell Signaling Cat#: 2535 Anti-rabbit IgG, HRP-linked Antibody Cell Signaling Cat#: 7074; RRID:AB_2099233 Anti-mouse IgG, HRP-linked Antibody Cell Signaling Cat#: 7076; RRID:AB_330924 Rabbit polyclonal anti-human/mouse beta-actin Cell Signaling Cat#: 4967; RRID:AB_330288 Chemicals, Peptides, and Recombinant Proteins IMDM GlutaMAX Thermo Fisher 3198-022 RPMI 1640 GlutaMAX Thermo Fisher 61870-010 X-Vivo 15 medium Lonza BE02-060F Seahorse XF DMEM medium, pH 7.4 Agilent 103575-100 Head-inactivated FCS Biochrom S 0115 – Lot# 1289W Penicillin-streptomycin Millipore P0781 2-mercaptoethanol Gibco #21985-023 Recombinant human TGF-beta Peprotech 100-21 (Continued on next page) e1 Immunity 54, 68–83.e1–e6, January 12, 2021
Article Title: Ribosome-Targeting Antibiotics Impair T Cell Effector Function and Ameliorate Autoimmunity by Blocking Mitochondrial Protein Synthesis.
Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Hamster monoclonal anti-mouse CD3 Bio X Cell Cat#: BE0001-1; RRID: AB_1107634 Hamster monoclonal anti-mouse CD28 Bio X Cell Cat#: BE00015-1; RRID: AB_1107624 Hamster monoclonal anti-mouse IFN-gamma Bio X Cell Cat#: BE0055; RRID: AB_1107694 Rat recombinant anti-mouse IL-12 p40 Bio X Cell Clone 17.8; RRID: AB_1107698 Rat monoclonal anti-mouse IL-4 Bio X Cell Cat#: BE0045; RRID: AB_1107707 Rat monoclonal anti-mouse CD4 eBioscience Clone 48-0041; RRID: AB_1107642 Rat monoclonal anti-mouse/rat IL-17A eBioscience Clone eBio17B7; RRID: AB_763580 Rat monoclonal anti-mouse IL-13 eBioscience Clone eBio13A; RRID: AB_763559 Rat monoclonal anti-mouse IFN-gamma eBioscience Clone XMG1.2; RRID: AB_315403 Mouse monoclonal anti-human/mouse T-bet eBioscience Clone eBio4B10; RRID: AB_763634 Rat monoclonal anti-mouse RORgt eBioscience Clone B2D; RRID: AB_315403 Rat monoclonal anti-mouse/human GATA-3 eBioscience Clone TWAJ; RRID: AB_1963600 Rat monoclonal anti-mouse/rat FoxP3 eBioscience Clone FJK-16s; RRID: AB_1518812 Mouse monoclonal anti-mouse CD154 (CD40 Ligand) eBioscience Clone MR1; RRID: AB_2561561 Mouse monoclonal anti-mouse/rat COX1 Abcam Cat#: ab154477 Mouse monoclonal anti-human CD4 Invitrogen Clone SK3; RRID: AB_1937227 Mouse monoclonal anti-human IL-17A eBIoscience Clone eBio64DEC17; RRID: AB_11063994 Mouse monoclonal anti-mouse antihuman CD3 BioLegend Ultra-LEAFTM Clone OKT3; RRID: AB_11150592 Mouse monoclonal anti-mouse antihuman CD28 BioLegend Ultra-LEAFTM Clone CD28.2; RRID: AB_314304 Recombinant anti-SDHA mAb Abcam aCat#: ab139181 Recombinant anti-ND1 mAb Abcam Cat#: ab181848 Recombinant anti-COX1 mAb Abcam Cat#: ab139181 HIF-1 alpha Rabbit mAb Novus biological Cat#: NB100-479: RRID: AB_10000633 AMPKa (23A3) Rabbit mAb Cell Signaling Cat#: 2603; RRID:AB_490795 Phospho-AMPKa (Thr172) Rabbit mAb Cell Signaling Cat#: 2535 Anti-rabbit IgG, HRP-linked Antibody Cell Signaling Cat#: 7074; RRID:AB_2099233 Anti-mouse IgG, HRP-linked Antibody Cell Signaling Cat#: 7076; RRID:AB_330924 Rabbit polyclonal anti-human/mouse beta-actin Cell Signaling Cat#: 4967; RRID:AB_330288 Chemicals, Peptides, and Recombinant Proteins IMDM GlutaMAX Thermo Fisher 3198-022 RPMI 1640 GlutaMAX Thermo Fisher 61870-010 X-Vivo 15 medium Lonza BE02-060F Seahorse XF DMEM medium, pH 7.4 Agilent 103575-100 Head-inactivated FCS Biochrom S 0115 – Lot# 1289W Penicillin-streptomycin Millipore P0781 2-mercaptoethanol Gibco #21985-023 Recombinant human TGF-beta Peprotech 100-21 (Continued on next page) Immunity 54, 1–16.e1–e6, January 12, 2021 e1
Gene Expression:
Article Title: Ribosome-Targeting Antibiotics Impair T Cell Effector Function and Ameliorate Autoimmunity by Blocking Mitochondrial Protein Synthesis
Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Hamster monoclonal anti-mouse CD3 Bio X Cell Cat#: BE0001-1; RRID: AB_1107634 Hamster monoclonal anti-mouse CD28 Bio X Cell Cat#: BE00015-1; RRID: AB_1107624 Hamster monoclonal anti-mouse IFN-gamma Bio X Cell Cat#: BE0055; RRID: AB_1107694 Rat recombinant anti-mouse IL-12 p40 Bio X Cell Clone 17.8; RRID: AB_1107698 Rat monoclonal anti-mouse IL-4 Bio X Cell Cat#: BE0045; RRID: AB_1107707 Rat monoclonal anti-mouse CD4 eBioscience Clone 48-0041; RRID: AB_1107642 Rat monoclonal anti-mouse/rat IL-17A eBioscience Clone eBio17B7; RRID: AB_763580 Rat monoclonal anti-mouse IL-13 eBioscience Clone eBio13A; RRID: AB_763559 Rat monoclonal anti-mouse IFN-gamma eBioscience Clone XMG1.2; RRID: AB_315403 Mouse monoclonal anti-human/mouse T-bet eBioscience Clone eBio4B10; RRID: AB_763634 Rat monoclonal anti-mouse RORgt eBioscience Clone B2D; RRID: AB_315403 Rat monoclonal anti-mouse/human GATA-3 eBioscience Clone TWAJ; RRID: AB_1963600 Rat monoclonal anti-mouse/rat FoxP3 eBioscience Clone FJK-16s; RRID: AB_1518812 Mouse monoclonal anti-mouse CD154 (CD40 Ligand) eBioscience Clone MR1; RRID: AB_2561561 Mouse monoclonal anti-mouse/rat COX1 Abcam Cat#: ab154477 Mouse monoclonal anti-human CD4 Invitrogen Clone SK3; RRID: AB_1937227 Mouse monoclonal anti-human IL-17A eBIoscience Clone eBio64DEC17; RRID: AB_11063994 Mouse monoclonal anti-mouse antihuman CD3 BioLegend Ultra-LEAFTM Clone OKT3; RRID: AB_11150592 Mouse monoclonal anti-mouse antihuman CD28 BioLegend Ultra-LEAFTM Clone CD28.2; RRID: AB_314304 Recombinant anti-SDHA mAb Abcam aCat#: ab139181 Recombinant anti-ND1 mAb Abcam Cat#: ab181848 Recombinant anti-COX1 mAb Abcam Cat#: ab139181 HIF-1 alpha Rabbit mAb Novus biological Cat#: NB100-479: RRID: AB_10000633 AMPKa (23A3) Rabbit mAb Cell Signaling Cat#: 2603; RRID:AB_490795 Phospho-AMPKa (Thr172) Rabbit mAb Cell Signaling Cat#: 2535 Anti-rabbit IgG, HRP-linked Antibody Cell Signaling Cat#: 7074; RRID:AB_2099233 Anti-mouse IgG, HRP-linked Antibody Cell Signaling Cat#: 7076; RRID:AB_330924 Rabbit polyclonal anti-human/mouse beta-actin Cell Signaling Cat#: 4967; RRID:AB_330288 Chemicals, Peptides, and Recombinant Proteins IMDM GlutaMAX Thermo Fisher 3198-022 RPMI 1640 GlutaMAX Thermo Fisher 61870-010 X-Vivo 15 medium Lonza BE02-060F Seahorse XF DMEM medium, pH 7.4 Agilent 103575-100 Head-inactivated FCS Biochrom S 0115 – Lot# 1289W Penicillin-streptomycin Millipore P0781 2-mercaptoethanol Gibco #21985-023 Recombinant human TGF-beta Peprotech 100-21 (Continued on next page) e1 Immunity 54, 68–83.e1–e6, January 12, 2021
Article Title: Ribosome-Targeting Antibiotics Impair T Cell Effector Function and Ameliorate Autoimmunity by Blocking Mitochondrial Protein Synthesis.
Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Hamster monoclonal anti-mouse CD3 Bio X Cell Cat#: BE0001-1; RRID: AB_1107634 Hamster monoclonal anti-mouse CD28 Bio X Cell Cat#: BE00015-1; RRID: AB_1107624 Hamster monoclonal anti-mouse IFN-gamma Bio X Cell Cat#: BE0055; RRID: AB_1107694 Rat recombinant anti-mouse IL-12 p40 Bio X Cell Clone 17.8; RRID: AB_1107698 Rat monoclonal anti-mouse IL-4 Bio X Cell Cat#: BE0045; RRID: AB_1107707 Rat monoclonal anti-mouse CD4 eBioscience Clone 48-0041; RRID: AB_1107642 Rat monoclonal anti-mouse/rat IL-17A eBioscience Clone eBio17B7; RRID: AB_763580 Rat monoclonal anti-mouse IL-13 eBioscience Clone eBio13A; RRID: AB_763559 Rat monoclonal anti-mouse IFN-gamma eBioscience Clone XMG1.2; RRID: AB_315403 Mouse monoclonal anti-human/mouse T-bet eBioscience Clone eBio4B10; RRID: AB_763634 Rat monoclonal anti-mouse RORgt eBioscience Clone B2D; RRID: AB_315403 Rat monoclonal anti-mouse/human GATA-3 eBioscience Clone TWAJ; RRID: AB_1963600 Rat monoclonal anti-mouse/rat FoxP3 eBioscience Clone FJK-16s; RRID: AB_1518812 Mouse monoclonal anti-mouse CD154 (CD40 Ligand) eBioscience Clone MR1; RRID: AB_2561561 Mouse monoclonal anti-mouse/rat COX1 Abcam Cat#: ab154477 Mouse monoclonal anti-human CD4 Invitrogen Clone SK3; RRID: AB_1937227 Mouse monoclonal anti-human IL-17A eBIoscience Clone eBio64DEC17; RRID: AB_11063994 Mouse monoclonal anti-mouse antihuman CD3 BioLegend Ultra-LEAFTM Clone OKT3; RRID: AB_11150592 Mouse monoclonal anti-mouse antihuman CD28 BioLegend Ultra-LEAFTM Clone CD28.2; RRID: AB_314304 Recombinant anti-SDHA mAb Abcam aCat#: ab139181 Recombinant anti-ND1 mAb Abcam Cat#: ab181848 Recombinant anti-COX1 mAb Abcam Cat#: ab139181 HIF-1 alpha Rabbit mAb Novus biological Cat#: NB100-479: RRID: AB_10000633 AMPKa (23A3) Rabbit mAb Cell Signaling Cat#: 2603; RRID:AB_490795 Phospho-AMPKa (Thr172) Rabbit mAb Cell Signaling Cat#: 2535 Anti-rabbit IgG, HRP-linked Antibody Cell Signaling Cat#: 7074; RRID:AB_2099233 Anti-mouse IgG, HRP-linked Antibody Cell Signaling Cat#: 7076; RRID:AB_330924 Rabbit polyclonal anti-human/mouse beta-actin Cell Signaling Cat#: 4967; RRID:AB_330288 Chemicals, Peptides, and Recombinant Proteins IMDM GlutaMAX Thermo Fisher 3198-022 RPMI 1640 GlutaMAX Thermo Fisher 61870-010 X-Vivo 15 medium Lonza BE02-060F Seahorse XF DMEM medium, pH 7.4 Agilent 103575-100 Head-inactivated FCS Biochrom S 0115 – Lot# 1289W Penicillin-streptomycin Millipore P0781 2-mercaptoethanol Gibco #21985-023 Recombinant human TGF-beta Peprotech 100-21 (Continued on next page) Immunity 54, 1–16.e1–e6, January 12, 2021 e1
Software:
Article Title: Ribosome-Targeting Antibiotics Impair T Cell Effector Function and Ameliorate Autoimmunity by Blocking Mitochondrial Protein Synthesis
Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Hamster monoclonal anti-mouse CD3 Bio X Cell Cat#: BE0001-1; RRID: AB_1107634 Hamster monoclonal anti-mouse CD28 Bio X Cell Cat#: BE00015-1; RRID: AB_1107624 Hamster monoclonal anti-mouse IFN-gamma Bio X Cell Cat#: BE0055; RRID: AB_1107694 Rat recombinant anti-mouse IL-12 p40 Bio X Cell Clone 17.8; RRID: AB_1107698 Rat monoclonal anti-mouse IL-4 Bio X Cell Cat#: BE0045; RRID: AB_1107707 Rat monoclonal anti-mouse CD4 eBioscience Clone 48-0041; RRID: AB_1107642 Rat monoclonal anti-mouse/rat IL-17A eBioscience Clone eBio17B7; RRID: AB_763580 Rat monoclonal anti-mouse IL-13 eBioscience Clone eBio13A; RRID: AB_763559 Rat monoclonal anti-mouse IFN-gamma eBioscience Clone XMG1.2; RRID: AB_315403 Mouse monoclonal anti-human/mouse T-bet eBioscience Clone eBio4B10; RRID: AB_763634 Rat monoclonal anti-mouse RORgt eBioscience Clone B2D; RRID: AB_315403 Rat monoclonal anti-mouse/human GATA-3 eBioscience Clone TWAJ; RRID: AB_1963600 Rat monoclonal anti-mouse/rat FoxP3 eBioscience Clone FJK-16s; RRID: AB_1518812 Mouse monoclonal anti-mouse CD154 (CD40 Ligand) eBioscience Clone MR1; RRID: AB_2561561 Mouse monoclonal anti-mouse/rat COX1 Abcam Cat#: ab154477 Mouse monoclonal anti-human CD4 Invitrogen Clone SK3; RRID: AB_1937227 Mouse monoclonal anti-human IL-17A eBIoscience Clone eBio64DEC17; RRID: AB_11063994 Mouse monoclonal anti-mouse antihuman CD3 BioLegend Ultra-LEAFTM Clone OKT3; RRID: AB_11150592 Mouse monoclonal anti-mouse antihuman CD28 BioLegend Ultra-LEAFTM Clone CD28.2; RRID: AB_314304 Recombinant anti-SDHA mAb Abcam aCat#: ab139181 Recombinant anti-ND1 mAb Abcam Cat#: ab181848 Recombinant anti-COX1 mAb Abcam Cat#: ab139181 HIF-1 alpha Rabbit mAb Novus biological Cat#: NB100-479: RRID: AB_10000633 AMPKa (23A3) Rabbit mAb Cell Signaling Cat#: 2603; RRID:AB_490795 Phospho-AMPKa (Thr172) Rabbit mAb Cell Signaling Cat#: 2535 Anti-rabbit IgG, HRP-linked Antibody Cell Signaling Cat#: 7074; RRID:AB_2099233 Anti-mouse IgG, HRP-linked Antibody Cell Signaling Cat#: 7076; RRID:AB_330924 Rabbit polyclonal anti-human/mouse beta-actin Cell Signaling Cat#: 4967; RRID:AB_330288 Chemicals, Peptides, and Recombinant Proteins IMDM GlutaMAX Thermo Fisher 3198-022 RPMI 1640 GlutaMAX Thermo Fisher 61870-010 X-Vivo 15 medium Lonza BE02-060F Seahorse XF DMEM medium, pH 7.4 Agilent 103575-100 Head-inactivated FCS Biochrom S 0115 – Lot# 1289W Penicillin-streptomycin Millipore P0781 2-mercaptoethanol Gibco #21985-023 Recombinant human TGF-beta Peprotech 100-21 (Continued on next page) e1 Immunity 54, 68–83.e1–e6, January 12, 2021
Article Title: Ribosome-Targeting Antibiotics Impair T Cell Effector Function and Ameliorate Autoimmunity by Blocking Mitochondrial Protein Synthesis.
Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Hamster monoclonal anti-mouse CD3 Bio X Cell Cat#: BE0001-1; RRID: AB_1107634 Hamster monoclonal anti-mouse CD28 Bio X Cell Cat#: BE00015-1; RRID: AB_1107624 Hamster monoclonal anti-mouse IFN-gamma Bio X Cell Cat#: BE0055; RRID: AB_1107694 Rat recombinant anti-mouse IL-12 p40 Bio X Cell Clone 17.8; RRID: AB_1107698 Rat monoclonal anti-mouse IL-4 Bio X Cell Cat#: BE0045; RRID: AB_1107707 Rat monoclonal anti-mouse CD4 eBioscience Clone 48-0041; RRID: AB_1107642 Rat monoclonal anti-mouse/rat IL-17A eBioscience Clone eBio17B7; RRID: AB_763580 Rat monoclonal anti-mouse IL-13 eBioscience Clone eBio13A; RRID: AB_763559 Rat monoclonal anti-mouse IFN-gamma eBioscience Clone XMG1.2; RRID: AB_315403 Mouse monoclonal anti-human/mouse T-bet eBioscience Clone eBio4B10; RRID: AB_763634 Rat monoclonal anti-mouse RORgt eBioscience Clone B2D; RRID: AB_315403 Rat monoclonal anti-mouse/human GATA-3 eBioscience Clone TWAJ; RRID: AB_1963600 Rat monoclonal anti-mouse/rat FoxP3 eBioscience Clone FJK-16s; RRID: AB_1518812 Mouse monoclonal anti-mouse CD154 (CD40 Ligand) eBioscience Clone MR1; RRID: AB_2561561 Mouse monoclonal anti-mouse/rat COX1 Abcam Cat#: ab154477 Mouse monoclonal anti-human CD4 Invitrogen Clone SK3; RRID: AB_1937227 Mouse monoclonal anti-human IL-17A eBIoscience Clone eBio64DEC17; RRID: AB_11063994 Mouse monoclonal anti-mouse antihuman CD3 BioLegend Ultra-LEAFTM Clone OKT3; RRID: AB_11150592 Mouse monoclonal anti-mouse antihuman CD28 BioLegend Ultra-LEAFTM Clone CD28.2; RRID: AB_314304 Recombinant anti-SDHA mAb Abcam aCat#: ab139181 Recombinant anti-ND1 mAb Abcam Cat#: ab181848 Recombinant anti-COX1 mAb Abcam Cat#: ab139181 HIF-1 alpha Rabbit mAb Novus biological Cat#: NB100-479: RRID: AB_10000633 AMPKa (23A3) Rabbit mAb Cell Signaling Cat#: 2603; RRID:AB_490795 Phospho-AMPKa (Thr172) Rabbit mAb Cell Signaling Cat#: 2535 Anti-rabbit IgG, HRP-linked Antibody Cell Signaling Cat#: 7074; RRID:AB_2099233 Anti-mouse IgG, HRP-linked Antibody Cell Signaling Cat#: 7076; RRID:AB_330924 Rabbit polyclonal anti-human/mouse beta-actin Cell Signaling Cat#: 4967; RRID:AB_330288 Chemicals, Peptides, and Recombinant Proteins IMDM GlutaMAX Thermo Fisher 3198-022 RPMI 1640 GlutaMAX Thermo Fisher 61870-010 X-Vivo 15 medium Lonza BE02-060F Seahorse XF DMEM medium, pH 7.4 Agilent 103575-100 Head-inactivated FCS Biochrom S 0115 – Lot# 1289W Penicillin-streptomycin Millipore P0781 2-mercaptoethanol Gibco #21985-023 Recombinant human TGF-beta Peprotech 100-21 (Continued on next page) Immunity 54, 1–16.e1–e6, January 12, 2021 e1
Virus:
Article Title: Ribosome-Targeting Antibiotics Impair T Cell Effector Function and Ameliorate Autoimmunity by Blocking Mitochondrial Protein Synthesis
Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Hamster monoclonal anti-mouse CD3 Bio X Cell Cat#: BE0001-1; RRID: AB_1107634 Hamster monoclonal anti-mouse CD28 Bio X Cell Cat#: BE00015-1; RRID: AB_1107624 Hamster monoclonal anti-mouse IFN-gamma Bio X Cell Cat#: BE0055; RRID: AB_1107694 Rat recombinant anti-mouse IL-12 p40 Bio X Cell Clone 17.8; RRID: AB_1107698 Rat monoclonal anti-mouse IL-4 Bio X Cell Cat#: BE0045; RRID: AB_1107707 Rat monoclonal anti-mouse CD4 eBioscience Clone 48-0041; RRID: AB_1107642 Rat monoclonal anti-mouse/rat IL-17A eBioscience Clone eBio17B7; RRID: AB_763580 Rat monoclonal anti-mouse IL-13 eBioscience Clone eBio13A; RRID: AB_763559 Rat monoclonal anti-mouse IFN-gamma eBioscience Clone XMG1.2; RRID: AB_315403 Mouse monoclonal anti-human/mouse T-bet eBioscience Clone eBio4B10; RRID: AB_763634 Rat monoclonal anti-mouse RORgt eBioscience Clone B2D; RRID: AB_315403 Rat monoclonal anti-mouse/human GATA-3 eBioscience Clone TWAJ; RRID: AB_1963600 Rat monoclonal anti-mouse/rat FoxP3 eBioscience Clone FJK-16s; RRID: AB_1518812 Mouse monoclonal anti-mouse CD154 (CD40 Ligand) eBioscience Clone MR1; RRID: AB_2561561 Mouse monoclonal anti-mouse/rat COX1 Abcam Cat#: ab154477 Mouse monoclonal anti-human CD4 Invitrogen Clone SK3; RRID: AB_1937227 Mouse monoclonal anti-human IL-17A eBIoscience Clone eBio64DEC17; RRID: AB_11063994 Mouse monoclonal anti-mouse antihuman CD3 BioLegend Ultra-LEAFTM Clone OKT3; RRID: AB_11150592 Mouse monoclonal anti-mouse antihuman CD28 BioLegend Ultra-LEAFTM Clone CD28.2; RRID: AB_314304 Recombinant anti-SDHA mAb Abcam aCat#: ab139181 Recombinant anti-ND1 mAb Abcam Cat#: ab181848 Recombinant anti-COX1 mAb Abcam Cat#: ab139181 HIF-1 alpha Rabbit mAb Novus biological Cat#: NB100-479: RRID: AB_10000633 AMPKa (23A3) Rabbit mAb Cell Signaling Cat#: 2603; RRID:AB_490795 Phospho-AMPKa (Thr172) Rabbit mAb Cell Signaling Cat#: 2535 Anti-rabbit IgG, HRP-linked Antibody Cell Signaling Cat#: 7074; RRID:AB_2099233 Anti-mouse IgG, HRP-linked Antibody Cell Signaling Cat#: 7076; RRID:AB_330924 Rabbit polyclonal anti-human/mouse beta-actin Cell Signaling Cat#: 4967; RRID:AB_330288 Chemicals, Peptides, and Recombinant Proteins IMDM GlutaMAX Thermo Fisher 3198-022 RPMI 1640 GlutaMAX Thermo Fisher 61870-010 X-Vivo 15 medium Lonza BE02-060F Seahorse XF DMEM medium, pH 7.4 Agilent 103575-100 Head-inactivated FCS Biochrom S 0115 – Lot# 1289W Penicillin-streptomycin Millipore P0781 2-mercaptoethanol Gibco #21985-023 Recombinant human TGF-beta Peprotech 100-21 (Continued on next page) e1 Immunity 54, 68–83.e1–e6, January 12, 2021
Article Title: Ribosome-Targeting Antibiotics Impair T Cell Effector Function and Ameliorate Autoimmunity by Blocking Mitochondrial Protein Synthesis.
Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Hamster monoclonal anti-mouse CD3 Bio X Cell Cat#: BE0001-1; RRID: AB_1107634 Hamster monoclonal anti-mouse CD28 Bio X Cell Cat#: BE00015-1; RRID: AB_1107624 Hamster monoclonal anti-mouse IFN-gamma Bio X Cell Cat#: BE0055; RRID: AB_1107694 Rat recombinant anti-mouse IL-12 p40 Bio X Cell Clone 17.8; RRID: AB_1107698 Rat monoclonal anti-mouse IL-4 Bio X Cell Cat#: BE0045; RRID: AB_1107707 Rat monoclonal anti-mouse CD4 eBioscience Clone 48-0041; RRID: AB_1107642 Rat monoclonal anti-mouse/rat IL-17A eBioscience Clone eBio17B7; RRID: AB_763580 Rat monoclonal anti-mouse IL-13 eBioscience Clone eBio13A; RRID: AB_763559 Rat monoclonal anti-mouse IFN-gamma eBioscience Clone XMG1.2; RRID: AB_315403 Mouse monoclonal anti-human/mouse T-bet eBioscience Clone eBio4B10; RRID: AB_763634 Rat monoclonal anti-mouse RORgt eBioscience Clone B2D; RRID: AB_315403 Rat monoclonal anti-mouse/human GATA-3 eBioscience Clone TWAJ; RRID: AB_1963600 Rat monoclonal anti-mouse/rat FoxP3 eBioscience Clone FJK-16s; RRID: AB_1518812 Mouse monoclonal anti-mouse CD154 (CD40 Ligand) eBioscience Clone MR1; RRID: AB_2561561 Mouse monoclonal anti-mouse/rat COX1 Abcam Cat#: ab154477 Mouse monoclonal anti-human CD4 Invitrogen Clone SK3; RRID: AB_1937227 Mouse monoclonal anti-human IL-17A eBIoscience Clone eBio64DEC17; RRID: AB_11063994 Mouse monoclonal anti-mouse antihuman CD3 BioLegend Ultra-LEAFTM Clone OKT3; RRID: AB_11150592 Mouse monoclonal anti-mouse antihuman CD28 BioLegend Ultra-LEAFTM Clone CD28.2; RRID: AB_314304 Recombinant anti-SDHA mAb Abcam aCat#: ab139181 Recombinant anti-ND1 mAb Abcam Cat#: ab181848 Recombinant anti-COX1 mAb Abcam Cat#: ab139181 HIF-1 alpha Rabbit mAb Novus biological Cat#: NB100-479: RRID: AB_10000633 AMPKa (23A3) Rabbit mAb Cell Signaling Cat#: 2603; RRID:AB_490795 Phospho-AMPKa (Thr172) Rabbit mAb Cell Signaling Cat#: 2535 Anti-rabbit IgG, HRP-linked Antibody Cell Signaling Cat#: 7074; RRID:AB_2099233 Anti-mouse IgG, HRP-linked Antibody Cell Signaling Cat#: 7076; RRID:AB_330924 Rabbit polyclonal anti-human/mouse beta-actin Cell Signaling Cat#: 4967; RRID:AB_330288 Chemicals, Peptides, and Recombinant Proteins IMDM GlutaMAX Thermo Fisher 3198-022 RPMI 1640 GlutaMAX Thermo Fisher 61870-010 X-Vivo 15 medium Lonza BE02-060F Seahorse XF DMEM medium, pH 7.4 Agilent 103575-100 Head-inactivated FCS Biochrom S 0115 – Lot# 1289W Penicillin-streptomycin Millipore P0781 2-mercaptoethanol Gibco #21985-023 Recombinant human TGF-beta Peprotech 100-21 (Continued on next page) Immunity 54, 1–16.e1–e6, January 12, 2021 e1
Expressing:
Article Title: Ribosome-Targeting Antibiotics Impair T Cell Effector Function and Ameliorate Autoimmunity by Blocking Mitochondrial Protein Synthesis
Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Hamster monoclonal anti-mouse CD3 Bio X Cell Cat#: BE0001-1; RRID: AB_1107634 Hamster monoclonal anti-mouse CD28 Bio X Cell Cat#: BE00015-1; RRID: AB_1107624 Hamster monoclonal anti-mouse IFN-gamma Bio X Cell Cat#: BE0055; RRID: AB_1107694 Rat recombinant anti-mouse IL-12 p40 Bio X Cell Clone 17.8; RRID: AB_1107698 Rat monoclonal anti-mouse IL-4 Bio X Cell Cat#: BE0045; RRID: AB_1107707 Rat monoclonal anti-mouse CD4 eBioscience Clone 48-0041; RRID: AB_1107642 Rat monoclonal anti-mouse/rat IL-17A eBioscience Clone eBio17B7; RRID: AB_763580 Rat monoclonal anti-mouse IL-13 eBioscience Clone eBio13A; RRID: AB_763559 Rat monoclonal anti-mouse IFN-gamma eBioscience Clone XMG1.2; RRID: AB_315403 Mouse monoclonal anti-human/mouse T-bet eBioscience Clone eBio4B10; RRID: AB_763634 Rat monoclonal anti-mouse RORgt eBioscience Clone B2D; RRID: AB_315403 Rat monoclonal anti-mouse/human GATA-3 eBioscience Clone TWAJ; RRID: AB_1963600 Rat monoclonal anti-mouse/rat FoxP3 eBioscience Clone FJK-16s; RRID: AB_1518812 Mouse monoclonal anti-mouse CD154 (CD40 Ligand) eBioscience Clone MR1; RRID: AB_2561561 Mouse monoclonal anti-mouse/rat COX1 Abcam Cat#: ab154477 Mouse monoclonal anti-human CD4 Invitrogen Clone SK3; RRID: AB_1937227 Mouse monoclonal anti-human IL-17A eBIoscience Clone eBio64DEC17; RRID: AB_11063994 Mouse monoclonal anti-mouse antihuman CD3 BioLegend Ultra-LEAFTM Clone OKT3; RRID: AB_11150592 Mouse monoclonal anti-mouse antihuman CD28 BioLegend Ultra-LEAFTM Clone CD28.2; RRID: AB_314304 Recombinant anti-SDHA mAb Abcam aCat#: ab139181 Recombinant anti-ND1 mAb Abcam Cat#: ab181848 Recombinant anti-COX1 mAb Abcam Cat#: ab139181 HIF-1 alpha Rabbit mAb Novus biological Cat#: NB100-479: RRID: AB_10000633 AMPKa (23A3) Rabbit mAb Cell Signaling Cat#: 2603; RRID:AB_490795 Phospho-AMPKa (Thr172) Rabbit mAb Cell Signaling Cat#: 2535 Anti-rabbit IgG, HRP-linked Antibody Cell Signaling Cat#: 7074; RRID:AB_2099233 Anti-mouse IgG, HRP-linked Antibody Cell Signaling Cat#: 7076; RRID:AB_330924 Rabbit polyclonal anti-human/mouse beta-actin Cell Signaling Cat#: 4967; RRID:AB_330288 Chemicals, Peptides, and Recombinant Proteins IMDM GlutaMAX Thermo Fisher 3198-022 RPMI 1640 GlutaMAX Thermo Fisher 61870-010 X-Vivo 15 medium Lonza BE02-060F Seahorse XF DMEM medium, pH 7.4 Agilent 103575-100 Head-inactivated FCS Biochrom S 0115 – Lot# 1289W Penicillin-streptomycin Millipore P0781 2-mercaptoethanol Gibco #21985-023 Recombinant human TGF-beta Peprotech 100-21 (Continued on next page) e1 Immunity 54, 68–83.e1–e6, January 12, 2021
Article Title: Ribosome-Targeting Antibiotics Impair T Cell Effector Function and Ameliorate Autoimmunity by Blocking Mitochondrial Protein Synthesis.
Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Hamster monoclonal anti-mouse CD3 Bio X Cell Cat#: BE0001-1; RRID: AB_1107634 Hamster monoclonal anti-mouse CD28 Bio X Cell Cat#: BE00015-1; RRID: AB_1107624 Hamster monoclonal anti-mouse IFN-gamma Bio X Cell Cat#: BE0055; RRID: AB_1107694 Rat recombinant anti-mouse IL-12 p40 Bio X Cell Clone 17.8; RRID: AB_1107698 Rat monoclonal anti-mouse IL-4 Bio X Cell Cat#: BE0045; RRID: AB_1107707 Rat monoclonal anti-mouse CD4 eBioscience Clone 48-0041; RRID: AB_1107642 Rat monoclonal anti-mouse/rat IL-17A eBioscience Clone eBio17B7; RRID: AB_763580 Rat monoclonal anti-mouse IL-13 eBioscience Clone eBio13A; RRID: AB_763559 Rat monoclonal anti-mouse IFN-gamma eBioscience Clone XMG1.2; RRID: AB_315403 Mouse monoclonal anti-human/mouse T-bet eBioscience Clone eBio4B10; RRID: AB_763634 Rat monoclonal anti-mouse RORgt eBioscience Clone B2D; RRID: AB_315403 Rat monoclonal anti-mouse/human GATA-3 eBioscience Clone TWAJ; RRID: AB_1963600 Rat monoclonal anti-mouse/rat FoxP3 eBioscience Clone FJK-16s; RRID: AB_1518812 Mouse monoclonal anti-mouse CD154 (CD40 Ligand) eBioscience Clone MR1; RRID: AB_2561561 Mouse monoclonal anti-mouse/rat COX1 Abcam Cat#: ab154477 Mouse monoclonal anti-human CD4 Invitrogen Clone SK3; RRID: AB_1937227 Mouse monoclonal anti-human IL-17A eBIoscience Clone eBio64DEC17; RRID: AB_11063994 Mouse monoclonal anti-mouse antihuman CD3 BioLegend Ultra-LEAFTM Clone OKT3; RRID: AB_11150592 Mouse monoclonal anti-mouse antihuman CD28 BioLegend Ultra-LEAFTM Clone CD28.2; RRID: AB_314304 Recombinant anti-SDHA mAb Abcam aCat#: ab139181 Recombinant anti-ND1 mAb Abcam Cat#: ab181848 Recombinant anti-COX1 mAb Abcam Cat#: ab139181 HIF-1 alpha Rabbit mAb Novus biological Cat#: NB100-479: RRID: AB_10000633 AMPKa (23A3) Rabbit mAb Cell Signaling Cat#: 2603; RRID:AB_490795 Phospho-AMPKa (Thr172) Rabbit mAb Cell Signaling Cat#: 2535 Anti-rabbit IgG, HRP-linked Antibody Cell Signaling Cat#: 7074; RRID:AB_2099233 Anti-mouse IgG, HRP-linked Antibody Cell Signaling Cat#: 7076; RRID:AB_330924 Rabbit polyclonal anti-human/mouse beta-actin Cell Signaling Cat#: 4967; RRID:AB_330288 Chemicals, Peptides, and Recombinant Proteins IMDM GlutaMAX Thermo Fisher 3198-022 RPMI 1640 GlutaMAX Thermo Fisher 61870-010 X-Vivo 15 medium Lonza BE02-060F Seahorse XF DMEM medium, pH 7.4 Agilent 103575-100 Head-inactivated FCS Biochrom S 0115 – Lot# 1289W Penicillin-streptomycin Millipore P0781 2-mercaptoethanol Gibco #21985-023 Recombinant human TGF-beta Peprotech 100-21 (Continued on next page) Immunity 54, 1–16.e1–e6, January 12, 2021 e1
Clinical Proteomics:
Article Title: Ribosome-Targeting Antibiotics Impair T Cell Effector Function and Ameliorate Autoimmunity by Blocking Mitochondrial Protein Synthesis
Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Hamster monoclonal anti-mouse CD3 Bio X Cell Cat#: BE0001-1; RRID: AB_1107634 Hamster monoclonal anti-mouse CD28 Bio X Cell Cat#: BE00015-1; RRID: AB_1107624 Hamster monoclonal anti-mouse IFN-gamma Bio X Cell Cat#: BE0055; RRID: AB_1107694 Rat recombinant anti-mouse IL-12 p40 Bio X Cell Clone 17.8; RRID: AB_1107698 Rat monoclonal anti-mouse IL-4 Bio X Cell Cat#: BE0045; RRID: AB_1107707 Rat monoclonal anti-mouse CD4 eBioscience Clone 48-0041; RRID: AB_1107642 Rat monoclonal anti-mouse/rat IL-17A eBioscience Clone eBio17B7; RRID: AB_763580 Rat monoclonal anti-mouse IL-13 eBioscience Clone eBio13A; RRID: AB_763559 Rat monoclonal anti-mouse IFN-gamma eBioscience Clone XMG1.2; RRID: AB_315403 Mouse monoclonal anti-human/mouse T-bet eBioscience Clone eBio4B10; RRID: AB_763634 Rat monoclonal anti-mouse RORgt eBioscience Clone B2D; RRID: AB_315403 Rat monoclonal anti-mouse/human GATA-3 eBioscience Clone TWAJ; RRID: AB_1963600 Rat monoclonal anti-mouse/rat FoxP3 eBioscience Clone FJK-16s; RRID: AB_1518812 Mouse monoclonal anti-mouse CD154 (CD40 Ligand) eBioscience Clone MR1; RRID: AB_2561561 Mouse monoclonal anti-mouse/rat COX1 Abcam Cat#: ab154477 Mouse monoclonal anti-human CD4 Invitrogen Clone SK3; RRID: AB_1937227 Mouse monoclonal anti-human IL-17A eBIoscience Clone eBio64DEC17; RRID: AB_11063994 Mouse monoclonal anti-mouse antihuman CD3 BioLegend Ultra-LEAFTM Clone OKT3; RRID: AB_11150592 Mouse monoclonal anti-mouse antihuman CD28 BioLegend Ultra-LEAFTM Clone CD28.2; RRID: AB_314304 Recombinant anti-SDHA mAb Abcam aCat#: ab139181 Recombinant anti-ND1 mAb Abcam Cat#: ab181848 Recombinant anti-COX1 mAb Abcam Cat#: ab139181 HIF-1 alpha Rabbit mAb Novus biological Cat#: NB100-479: RRID: AB_10000633 AMPKa (23A3) Rabbit mAb Cell Signaling Cat#: 2603; RRID:AB_490795 Phospho-AMPKa (Thr172) Rabbit mAb Cell Signaling Cat#: 2535 Anti-rabbit IgG, HRP-linked Antibody Cell Signaling Cat#: 7074; RRID:AB_2099233 Anti-mouse IgG, HRP-linked Antibody Cell Signaling Cat#: 7076; RRID:AB_330924 Rabbit polyclonal anti-human/mouse beta-actin Cell Signaling Cat#: 4967; RRID:AB_330288 Chemicals, Peptides, and Recombinant Proteins IMDM GlutaMAX Thermo Fisher 3198-022 RPMI 1640 GlutaMAX Thermo Fisher 61870-010 X-Vivo 15 medium Lonza BE02-060F Seahorse XF DMEM medium, pH 7.4 Agilent 103575-100 Head-inactivated FCS Biochrom S 0115 – Lot# 1289W Penicillin-streptomycin Millipore P0781 2-mercaptoethanol Gibco #21985-023 Recombinant human TGF-beta Peprotech 100-21 (Continued on next page) e1 Immunity 54, 68–83.e1–e6, January 12, 2021
Article Title: Ribosome-Targeting Antibiotics Impair T Cell Effector Function and Ameliorate Autoimmunity by Blocking Mitochondrial Protein Synthesis.
Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Hamster monoclonal anti-mouse CD3 Bio X Cell Cat#: BE0001-1; RRID: AB_1107634 Hamster monoclonal anti-mouse CD28 Bio X Cell Cat#: BE00015-1; RRID: AB_1107624 Hamster monoclonal anti-mouse IFN-gamma Bio X Cell Cat#: BE0055; RRID: AB_1107694 Rat recombinant anti-mouse IL-12 p40 Bio X Cell Clone 17.8; RRID: AB_1107698 Rat monoclonal anti-mouse IL-4 Bio X Cell Cat#: BE0045; RRID: AB_1107707 Rat monoclonal anti-mouse CD4 eBioscience Clone 48-0041; RRID: AB_1107642 Rat monoclonal anti-mouse/rat IL-17A eBioscience Clone eBio17B7; RRID: AB_763580 Rat monoclonal anti-mouse IL-13 eBioscience Clone eBio13A; RRID: AB_763559 Rat monoclonal anti-mouse IFN-gamma eBioscience Clone XMG1.2; RRID: AB_315403 Mouse monoclonal anti-human/mouse T-bet eBioscience Clone eBio4B10; RRID: AB_763634 Rat monoclonal anti-mouse RORgt eBioscience Clone B2D; RRID: AB_315403 Rat monoclonal anti-mouse/human GATA-3 eBioscience Clone TWAJ; RRID: AB_1963600 Rat monoclonal anti-mouse/rat FoxP3 eBioscience Clone FJK-16s; RRID: AB_1518812 Mouse monoclonal anti-mouse CD154 (CD40 Ligand) eBioscience Clone MR1; RRID: AB_2561561 Mouse monoclonal anti-mouse/rat COX1 Abcam Cat#: ab154477 Mouse monoclonal anti-human CD4 Invitrogen Clone SK3; RRID: AB_1937227 Mouse monoclonal anti-human IL-17A eBIoscience Clone eBio64DEC17; RRID: AB_11063994 Mouse monoclonal anti-mouse antihuman CD3 BioLegend Ultra-LEAFTM Clone OKT3; RRID: AB_11150592 Mouse monoclonal anti-mouse antihuman CD28 BioLegend Ultra-LEAFTM Clone CD28.2; RRID: AB_314304 Recombinant anti-SDHA mAb Abcam aCat#: ab139181 Recombinant anti-ND1 mAb Abcam Cat#: ab181848 Recombinant anti-COX1 mAb Abcam Cat#: ab139181 HIF-1 alpha Rabbit mAb Novus biological Cat#: NB100-479: RRID: AB_10000633 AMPKa (23A3) Rabbit mAb Cell Signaling Cat#: 2603; RRID:AB_490795 Phospho-AMPKa (Thr172) Rabbit mAb Cell Signaling Cat#: 2535 Anti-rabbit IgG, HRP-linked Antibody Cell Signaling Cat#: 7074; RRID:AB_2099233 Anti-mouse IgG, HRP-linked Antibody Cell Signaling Cat#: 7076; RRID:AB_330924 Rabbit polyclonal anti-human/mouse beta-actin Cell Signaling Cat#: 4967; RRID:AB_330288 Chemicals, Peptides, and Recombinant Proteins IMDM GlutaMAX Thermo Fisher 3198-022 RPMI 1640 GlutaMAX Thermo Fisher 61870-010 X-Vivo 15 medium Lonza BE02-060F Seahorse XF DMEM medium, pH 7.4 Agilent 103575-100 Head-inactivated FCS Biochrom S 0115 – Lot# 1289W Penicillin-streptomycin Millipore P0781 2-mercaptoethanol Gibco #21985-023 Recombinant human TGF-beta Peprotech 100-21 (Continued on next page) Immunity 54, 1–16.e1–e6, January 12, 2021 e1
Membrane:
Article Title: Ribosome-Targeting Antibiotics Impair T Cell Effector Function and Ameliorate Autoimmunity by Blocking Mitochondrial Protein Synthesis
Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Hamster monoclonal anti-mouse CD3 Bio X Cell Cat#: BE0001-1; RRID: AB_1107634 Hamster monoclonal anti-mouse CD28 Bio X Cell Cat#: BE00015-1; RRID: AB_1107624 Hamster monoclonal anti-mouse IFN-gamma Bio X Cell Cat#: BE0055; RRID: AB_1107694 Rat recombinant anti-mouse IL-12 p40 Bio X Cell Clone 17.8; RRID: AB_1107698 Rat monoclonal anti-mouse IL-4 Bio X Cell Cat#: BE0045; RRID: AB_1107707 Rat monoclonal anti-mouse CD4 eBioscience Clone 48-0041; RRID: AB_1107642 Rat monoclonal anti-mouse/rat IL-17A eBioscience Clone eBio17B7; RRID: AB_763580 Rat monoclonal anti-mouse IL-13 eBioscience Clone eBio13A; RRID: AB_763559 Rat monoclonal anti-mouse IFN-gamma eBioscience Clone XMG1.2; RRID: AB_315403 Mouse monoclonal anti-human/mouse T-bet eBioscience Clone eBio4B10; RRID: AB_763634 Rat monoclonal anti-mouse RORgt eBioscience Clone B2D; RRID: AB_315403 Rat monoclonal anti-mouse/human GATA-3 eBioscience Clone TWAJ; RRID: AB_1963600 Rat monoclonal anti-mouse/rat FoxP3 eBioscience Clone FJK-16s; RRID: AB_1518812 Mouse monoclonal anti-mouse CD154 (CD40 Ligand) eBioscience Clone MR1; RRID: AB_2561561 Mouse monoclonal anti-mouse/rat COX1 Abcam Cat#: ab154477 Mouse monoclonal anti-human CD4 Invitrogen Clone SK3; RRID: AB_1937227 Mouse monoclonal anti-human IL-17A eBIoscience Clone eBio64DEC17; RRID: AB_11063994 Mouse monoclonal anti-mouse antihuman CD3 BioLegend Ultra-LEAFTM Clone OKT3; RRID: AB_11150592 Mouse monoclonal anti-mouse antihuman CD28 BioLegend Ultra-LEAFTM Clone CD28.2; RRID: AB_314304 Recombinant anti-SDHA mAb Abcam aCat#: ab139181 Recombinant anti-ND1 mAb Abcam Cat#: ab181848 Recombinant anti-COX1 mAb Abcam Cat#: ab139181 HIF-1 alpha Rabbit mAb Novus biological Cat#: NB100-479: RRID: AB_10000633 AMPKa (23A3) Rabbit mAb Cell Signaling Cat#: 2603; RRID:AB_490795 Phospho-AMPKa (Thr172) Rabbit mAb Cell Signaling Cat#: 2535 Anti-rabbit IgG, HRP-linked Antibody Cell Signaling Cat#: 7074; RRID:AB_2099233 Anti-mouse IgG, HRP-linked Antibody Cell Signaling Cat#: 7076; RRID:AB_330924 Rabbit polyclonal anti-human/mouse beta-actin Cell Signaling Cat#: 4967; RRID:AB_330288 Chemicals, Peptides, and Recombinant Proteins IMDM GlutaMAX Thermo Fisher 3198-022 RPMI 1640 GlutaMAX Thermo Fisher 61870-010 X-Vivo 15 medium Lonza BE02-060F Seahorse XF DMEM medium, pH 7.4 Agilent 103575-100 Head-inactivated FCS Biochrom S 0115 – Lot# 1289W Penicillin-streptomycin Millipore P0781 2-mercaptoethanol Gibco #21985-023 Recombinant human TGF-beta Peprotech 100-21 (Continued on next page) e1 Immunity 54, 68–83.e1–e6, January 12, 2021
Article Title: Ribosome-Targeting Antibiotics Impair T Cell Effector Function and Ameliorate Autoimmunity by Blocking Mitochondrial Protein Synthesis.
Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Hamster monoclonal anti-mouse CD3 Bio X Cell Cat#: BE0001-1; RRID: AB_1107634 Hamster monoclonal anti-mouse CD28 Bio X Cell Cat#: BE00015-1; RRID: AB_1107624 Hamster monoclonal anti-mouse IFN-gamma Bio X Cell Cat#: BE0055; RRID: AB_1107694 Rat recombinant anti-mouse IL-12 p40 Bio X Cell Clone 17.8; RRID: AB_1107698 Rat monoclonal anti-mouse IL-4 Bio X Cell Cat#: BE0045; RRID: AB_1107707 Rat monoclonal anti-mouse CD4 eBioscience Clone 48-0041; RRID: AB_1107642 Rat monoclonal anti-mouse/rat IL-17A eBioscience Clone eBio17B7; RRID: AB_763580 Rat monoclonal anti-mouse IL-13 eBioscience Clone eBio13A; RRID: AB_763559 Rat monoclonal anti-mouse IFN-gamma eBioscience Clone XMG1.2; RRID: AB_315403 Mouse monoclonal anti-human/mouse T-bet eBioscience Clone eBio4B10; RRID: AB_763634 Rat monoclonal anti-mouse RORgt eBioscience Clone B2D; RRID: AB_315403 Rat monoclonal anti-mouse/human GATA-3 eBioscience Clone TWAJ; RRID: AB_1963600 Rat monoclonal anti-mouse/rat FoxP3 eBioscience Clone FJK-16s; RRID: AB_1518812 Mouse monoclonal anti-mouse CD154 (CD40 Ligand) eBioscience Clone MR1; RRID: AB_2561561 Mouse monoclonal anti-mouse/rat COX1 Abcam Cat#: ab154477 Mouse monoclonal anti-human CD4 Invitrogen Clone SK3; RRID: AB_1937227 Mouse monoclonal anti-human IL-17A eBIoscience Clone eBio64DEC17; RRID: AB_11063994 Mouse monoclonal anti-mouse antihuman CD3 BioLegend Ultra-LEAFTM Clone OKT3; RRID: AB_11150592 Mouse monoclonal anti-mouse antihuman CD28 BioLegend Ultra-LEAFTM Clone CD28.2; RRID: AB_314304 Recombinant anti-SDHA mAb Abcam aCat#: ab139181 Recombinant anti-ND1 mAb Abcam Cat#: ab181848 Recombinant anti-COX1 mAb Abcam Cat#: ab139181 HIF-1 alpha Rabbit mAb Novus biological Cat#: NB100-479: RRID: AB_10000633 AMPKa (23A3) Rabbit mAb Cell Signaling Cat#: 2603; RRID:AB_490795 Phospho-AMPKa (Thr172) Rabbit mAb Cell Signaling Cat#: 2535 Anti-rabbit IgG, HRP-linked Antibody Cell Signaling Cat#: 7074; RRID:AB_2099233 Anti-mouse IgG, HRP-linked Antibody Cell Signaling Cat#: 7076; RRID:AB_330924 Rabbit polyclonal anti-human/mouse beta-actin Cell Signaling Cat#: 4967; RRID:AB_330288 Chemicals, Peptides, and Recombinant Proteins IMDM GlutaMAX Thermo Fisher 3198-022 RPMI 1640 GlutaMAX Thermo Fisher 61870-010 X-Vivo 15 medium Lonza BE02-060F Seahorse XF DMEM medium, pH 7.4 Agilent 103575-100 Head-inactivated FCS Biochrom S 0115 – Lot# 1289W Penicillin-streptomycin Millipore P0781 2-mercaptoethanol Gibco #21985-023 Recombinant human TGF-beta Peprotech 100-21 (Continued on next page) Immunity 54, 1–16.e1–e6, January 12, 2021 e1
SYBR Green Assay:
Article Title: Ribosome-Targeting Antibiotics Impair T Cell Effector Function and Ameliorate Autoimmunity by Blocking Mitochondrial Protein Synthesis
Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Hamster monoclonal anti-mouse CD3 Bio X Cell Cat#: BE0001-1; RRID: AB_1107634 Hamster monoclonal anti-mouse CD28 Bio X Cell Cat#: BE00015-1; RRID: AB_1107624 Hamster monoclonal anti-mouse IFN-gamma Bio X Cell Cat#: BE0055; RRID: AB_1107694 Rat recombinant anti-mouse IL-12 p40 Bio X Cell Clone 17.8; RRID: AB_1107698 Rat monoclonal anti-mouse IL-4 Bio X Cell Cat#: BE0045; RRID: AB_1107707 Rat monoclonal anti-mouse CD4 eBioscience Clone 48-0041; RRID: AB_1107642 Rat monoclonal anti-mouse/rat IL-17A eBioscience Clone eBio17B7; RRID: AB_763580 Rat monoclonal anti-mouse IL-13 eBioscience Clone eBio13A; RRID: AB_763559 Rat monoclonal anti-mouse IFN-gamma eBioscience Clone XMG1.2; RRID: AB_315403 Mouse monoclonal anti-human/mouse T-bet eBioscience Clone eBio4B10; RRID: AB_763634 Rat monoclonal anti-mouse RORgt eBioscience Clone B2D; RRID: AB_315403 Rat monoclonal anti-mouse/human GATA-3 eBioscience Clone TWAJ; RRID: AB_1963600 Rat monoclonal anti-mouse/rat FoxP3 eBioscience Clone FJK-16s; RRID: AB_1518812 Mouse monoclonal anti-mouse CD154 (CD40 Ligand) eBioscience Clone MR1; RRID: AB_2561561 Mouse monoclonal anti-mouse/rat COX1 Abcam Cat#: ab154477 Mouse monoclonal anti-human CD4 Invitrogen Clone SK3; RRID: AB_1937227 Mouse monoclonal anti-human IL-17A eBIoscience Clone eBio64DEC17; RRID: AB_11063994 Mouse monoclonal anti-mouse antihuman CD3 BioLegend Ultra-LEAFTM Clone OKT3; RRID: AB_11150592 Mouse monoclonal anti-mouse antihuman CD28 BioLegend Ultra-LEAFTM Clone CD28.2; RRID: AB_314304 Recombinant anti-SDHA mAb Abcam aCat#: ab139181 Recombinant anti-ND1 mAb Abcam Cat#: ab181848 Recombinant anti-COX1 mAb Abcam Cat#: ab139181 HIF-1 alpha Rabbit mAb Novus biological Cat#: NB100-479: RRID: AB_10000633 AMPKa (23A3) Rabbit mAb Cell Signaling Cat#: 2603; RRID:AB_490795 Phospho-AMPKa (Thr172) Rabbit mAb Cell Signaling Cat#: 2535 Anti-rabbit IgG, HRP-linked Antibody Cell Signaling Cat#: 7074; RRID:AB_2099233 Anti-mouse IgG, HRP-linked Antibody Cell Signaling Cat#: 7076; RRID:AB_330924 Rabbit polyclonal anti-human/mouse beta-actin Cell Signaling Cat#: 4967; RRID:AB_330288 Chemicals, Peptides, and Recombinant Proteins IMDM GlutaMAX Thermo Fisher 3198-022 RPMI 1640 GlutaMAX Thermo Fisher 61870-010 X-Vivo 15 medium Lonza BE02-060F Seahorse XF DMEM medium, pH 7.4 Agilent 103575-100 Head-inactivated FCS Biochrom S 0115 – Lot# 1289W Penicillin-streptomycin Millipore P0781 2-mercaptoethanol Gibco #21985-023 Recombinant human TGF-beta Peprotech 100-21 (Continued on next page) e1 Immunity 54, 68–83.e1–e6, January 12, 2021
Article Title: Ribosome-Targeting Antibiotics Impair T Cell Effector Function and Ameliorate Autoimmunity by Blocking Mitochondrial Protein Synthesis.
Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Hamster monoclonal anti-mouse CD3 Bio X Cell Cat#: BE0001-1; RRID: AB_1107634 Hamster monoclonal anti-mouse CD28 Bio X Cell Cat#: BE00015-1; RRID: AB_1107624 Hamster monoclonal anti-mouse IFN-gamma Bio X Cell Cat#: BE0055; RRID: AB_1107694 Rat recombinant anti-mouse IL-12 p40 Bio X Cell Clone 17.8; RRID: AB_1107698 Rat monoclonal anti-mouse IL-4 Bio X Cell Cat#: BE0045; RRID: AB_1107707 Rat monoclonal anti-mouse CD4 eBioscience Clone 48-0041; RRID: AB_1107642 Rat monoclonal anti-mouse/rat IL-17A eBioscience Clone eBio17B7; RRID: AB_763580 Rat monoclonal anti-mouse IL-13 eBioscience Clone eBio13A; RRID: AB_763559 Rat monoclonal anti-mouse IFN-gamma eBioscience Clone XMG1.2; RRID: AB_315403 Mouse monoclonal anti-human/mouse T-bet eBioscience Clone eBio4B10; RRID: AB_763634 Rat monoclonal anti-mouse RORgt eBioscience Clone B2D; RRID: AB_315403 Rat monoclonal anti-mouse/human GATA-3 eBioscience Clone TWAJ; RRID: AB_1963600 Rat monoclonal anti-mouse/rat FoxP3 eBioscience Clone FJK-16s; RRID: AB_1518812 Mouse monoclonal anti-mouse CD154 (CD40 Ligand) eBioscience Clone MR1; RRID: AB_2561561 Mouse monoclonal anti-mouse/rat COX1 Abcam Cat#: ab154477 Mouse monoclonal anti-human CD4 Invitrogen Clone SK3; RRID: AB_1937227 Mouse monoclonal anti-human IL-17A eBIoscience Clone eBio64DEC17; RRID: AB_11063994 Mouse monoclonal anti-mouse antihuman CD3 BioLegend Ultra-LEAFTM Clone OKT3; RRID: AB_11150592 Mouse monoclonal anti-mouse antihuman CD28 BioLegend Ultra-LEAFTM Clone CD28.2; RRID: AB_314304 Recombinant anti-SDHA mAb Abcam aCat#: ab139181 Recombinant anti-ND1 mAb Abcam Cat#: ab181848 Recombinant anti-COX1 mAb Abcam Cat#: ab139181 HIF-1 alpha Rabbit mAb Novus biological Cat#: NB100-479: RRID: AB_10000633 AMPKa (23A3) Rabbit mAb Cell Signaling Cat#: 2603; RRID:AB_490795 Phospho-AMPKa (Thr172) Rabbit mAb Cell Signaling Cat#: 2535 Anti-rabbit IgG, HRP-linked Antibody Cell Signaling Cat#: 7074; RRID:AB_2099233 Anti-mouse IgG, HRP-linked Antibody Cell Signaling Cat#: 7076; RRID:AB_330924 Rabbit polyclonal anti-human/mouse beta-actin Cell Signaling Cat#: 4967; RRID:AB_330288 Chemicals, Peptides, and Recombinant Proteins IMDM GlutaMAX Thermo Fisher 3198-022 RPMI 1640 GlutaMAX Thermo Fisher 61870-010 X-Vivo 15 medium Lonza BE02-060F Seahorse XF DMEM medium, pH 7.4 Agilent 103575-100 Head-inactivated FCS Biochrom S 0115 – Lot# 1289W Penicillin-streptomycin Millipore P0781 2-mercaptoethanol Gibco #21985-023 Recombinant human TGF-beta Peprotech 100-21 (Continued on next page) Immunity 54, 1–16.e1–e6, January 12, 2021 e1
Reverse Transcription:
Article Title: Ribosome-Targeting Antibiotics Impair T Cell Effector Function and Ameliorate Autoimmunity by Blocking Mitochondrial Protein Synthesis
Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Hamster monoclonal anti-mouse CD3 Bio X Cell Cat#: BE0001-1; RRID: AB_1107634 Hamster monoclonal anti-mouse CD28 Bio X Cell Cat#: BE00015-1; RRID: AB_1107624 Hamster monoclonal anti-mouse IFN-gamma Bio X Cell Cat#: BE0055; RRID: AB_1107694 Rat recombinant anti-mouse IL-12 p40 Bio X Cell Clone 17.8; RRID: AB_1107698 Rat monoclonal anti-mouse IL-4 Bio X Cell Cat#: BE0045; RRID: AB_1107707 Rat monoclonal anti-mouse CD4 eBioscience Clone 48-0041; RRID: AB_1107642 Rat monoclonal anti-mouse/rat IL-17A eBioscience Clone eBio17B7; RRID: AB_763580 Rat monoclonal anti-mouse IL-13 eBioscience Clone eBio13A; RRID: AB_763559 Rat monoclonal anti-mouse IFN-gamma eBioscience Clone XMG1.2; RRID: AB_315403 Mouse monoclonal anti-human/mouse T-bet eBioscience Clone eBio4B10; RRID: AB_763634 Rat monoclonal anti-mouse RORgt eBioscience Clone B2D; RRID: AB_315403 Rat monoclonal anti-mouse/human GATA-3 eBioscience Clone TWAJ; RRID: AB_1963600 Rat monoclonal anti-mouse/rat FoxP3 eBioscience Clone FJK-16s; RRID: AB_1518812 Mouse monoclonal anti-mouse CD154 (CD40 Ligand) eBioscience Clone MR1; RRID: AB_2561561 Mouse monoclonal anti-mouse/rat COX1 Abcam Cat#: ab154477 Mouse monoclonal anti-human CD4 Invitrogen Clone SK3; RRID: AB_1937227 Mouse monoclonal anti-human IL-17A eBIoscience Clone eBio64DEC17; RRID: AB_11063994 Mouse monoclonal anti-mouse antihuman CD3 BioLegend Ultra-LEAFTM Clone OKT3; RRID: AB_11150592 Mouse monoclonal anti-mouse antihuman CD28 BioLegend Ultra-LEAFTM Clone CD28.2; RRID: AB_314304 Recombinant anti-SDHA mAb Abcam aCat#: ab139181 Recombinant anti-ND1 mAb Abcam Cat#: ab181848 Recombinant anti-COX1 mAb Abcam Cat#: ab139181 HIF-1 alpha Rabbit mAb Novus biological Cat#: NB100-479: RRID: AB_10000633 AMPKa (23A3) Rabbit mAb Cell Signaling Cat#: 2603; RRID:AB_490795 Phospho-AMPKa (Thr172) Rabbit mAb Cell Signaling Cat#: 2535 Anti-rabbit IgG, HRP-linked Antibody Cell Signaling Cat#: 7074; RRID:AB_2099233 Anti-mouse IgG, HRP-linked Antibody Cell Signaling Cat#: 7076; RRID:AB_330924 Rabbit polyclonal anti-human/mouse beta-actin Cell Signaling Cat#: 4967; RRID:AB_330288 Chemicals, Peptides, and Recombinant Proteins IMDM GlutaMAX Thermo Fisher 3198-022 RPMI 1640 GlutaMAX Thermo Fisher 61870-010 X-Vivo 15 medium Lonza BE02-060F Seahorse XF DMEM medium, pH 7.4 Agilent 103575-100 Head-inactivated FCS Biochrom S 0115 – Lot# 1289W Penicillin-streptomycin Millipore P0781 2-mercaptoethanol Gibco #21985-023 Recombinant human TGF-beta Peprotech 100-21 (Continued on next page) e1 Immunity 54, 68–83.e1–e6, January 12, 2021
Article Title: Ribosome-Targeting Antibiotics Impair T Cell Effector Function and Ameliorate Autoimmunity by Blocking Mitochondrial Protein Synthesis.
Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Hamster monoclonal anti-mouse CD3 Bio X Cell Cat#: BE0001-1; RRID: AB_1107634 Hamster monoclonal anti-mouse CD28 Bio X Cell Cat#: BE00015-1; RRID: AB_1107624 Hamster monoclonal anti-mouse IFN-gamma Bio X Cell Cat#: BE0055; RRID: AB_1107694 Rat recombinant anti-mouse IL-12 p40 Bio X Cell Clone 17.8; RRID: AB_1107698 Rat monoclonal anti-mouse IL-4 Bio X Cell Cat#: BE0045; RRID: AB_1107707 Rat monoclonal anti-mouse CD4 eBioscience Clone 48-0041; RRID: AB_1107642 Rat monoclonal anti-mouse/rat IL-17A eBioscience Clone eBio17B7; RRID: AB_763580 Rat monoclonal anti-mouse IL-13 eBioscience Clone eBio13A; RRID: AB_763559 Rat monoclonal anti-mouse IFN-gamma eBioscience Clone XMG1.2; RRID: AB_315403 Mouse monoclonal anti-human/mouse T-bet eBioscience Clone eBio4B10; RRID: AB_763634 Rat monoclonal anti-mouse RORgt eBioscience Clone B2D; RRID: AB_315403 Rat monoclonal anti-mouse/human GATA-3 eBioscience Clone TWAJ; RRID: AB_1963600 Rat monoclonal anti-mouse/rat FoxP3 eBioscience Clone FJK-16s; RRID: AB_1518812 Mouse monoclonal anti-mouse CD154 (CD40 Ligand) eBioscience Clone MR1; RRID: AB_2561561 Mouse monoclonal anti-mouse/rat COX1 Abcam Cat#: ab154477 Mouse monoclonal anti-human CD4 Invitrogen Clone SK3; RRID: AB_1937227 Mouse monoclonal anti-human IL-17A eBIoscience Clone eBio64DEC17; RRID: AB_11063994 Mouse monoclonal anti-mouse antihuman CD3 BioLegend Ultra-LEAFTM Clone OKT3; RRID: AB_11150592 Mouse monoclonal anti-mouse antihuman CD28 BioLegend Ultra-LEAFTM Clone CD28.2; RRID: AB_314304 Recombinant anti-SDHA mAb Abcam aCat#: ab139181 Recombinant anti-ND1 mAb Abcam Cat#: ab181848 Recombinant anti-COX1 mAb Abcam Cat#: ab139181 HIF-1 alpha Rabbit mAb Novus biological Cat#: NB100-479: RRID: AB_10000633 AMPKa (23A3) Rabbit mAb Cell Signaling Cat#: 2603; RRID:AB_490795 Phospho-AMPKa (Thr172) Rabbit mAb Cell Signaling Cat#: 2535 Anti-rabbit IgG, HRP-linked Antibody Cell Signaling Cat#: 7074; RRID:AB_2099233 Anti-mouse IgG, HRP-linked Antibody Cell Signaling Cat#: 7076; RRID:AB_330924 Rabbit polyclonal anti-human/mouse beta-actin Cell Signaling Cat#: 4967; RRID:AB_330288 Chemicals, Peptides, and Recombinant Proteins IMDM GlutaMAX Thermo Fisher 3198-022 RPMI 1640 GlutaMAX Thermo Fisher 61870-010 X-Vivo 15 medium Lonza BE02-060F Seahorse XF DMEM medium, pH 7.4 Agilent 103575-100 Head-inactivated FCS Biochrom S 0115 – Lot# 1289W Penicillin-streptomycin Millipore P0781 2-mercaptoethanol Gibco #21985-023 Recombinant human TGF-beta Peprotech 100-21 (Continued on next page) Immunity 54, 1–16.e1–e6, January 12, 2021 e1
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